Microbes
2,435 species
| Species | Healthy guts | Samples ↓ | Products |
|---|---|---|---|
 Faecalibacterium prausnitzii Bacillota · Oscillospiraceae | 20,688 | 0 | |
 Blautia wexlerae Bacillota · Lachnospiraceae | 20,683 | 0 | |
 Bacteroides uniformis Bacteroidota · Bacteroidaceae | 20,417 | 0 | |
 Phocaeicola vulgatus Bacteroidota · Bacteroidaceae | 19,640 | 0 | |
 Parabacteroides distasonis Bacteroidota · Tannerellaceae | 18,684 | 0 | |
 Fusicatenibacter saccharivorans Bacillota · Lachnospiraceae | 18,293 | 0 | |
 Blautia faecis Bacillota · Lachnospiraceae | 18,046 | 0 | |
 Anaerostipes hadrus Bacillota · Lachnospiraceae | 17,950 | 0 | |
 Bacteroides ovatus Bacteroidota · Bacteroidaceae | 17,825 | 0 | |
 Agathobacter rectalis Bacillota · Lachnospiraceae | 17,543 | 0 | |
 Flavonifractor plautii Bacillota · Oscillospiraceae | 17,023 | 0 | |
 Agathobaculum butyriciproducens Bacillota · Butyricicoccaceae | 16,899 | 0 | |
 Bifidobacterium longum Actinomycetota · Bifidobacteriaceae | 16,852 | 1,355 | |
 Bacteroides thetaiotaomicron Bacteroidota · Bacteroidaceae | 16,618 | 0 | |
 Dorea longicatena Bacillota · Lachnospiraceae | 16,441 | 0 | |
 Ruthenibacterium lactatiformans Bacillota · Oscillospiraceae | 16,277 | 0 | |
 Dysosmobacter welbionis Bacillota · Oscillospiraceae | 16,177 | 0 | |
 Mediterraneibacter gnavus Bacillota · Lachnospiraceae | 16,041 | 0 | |
 Roseburia inulinivorans Bacillota · Lachnospiraceae | 15,651 | 0 | |
 Blautia obeum Bacillota · Lachnospiraceae | 15,479 | 0 | |
 Alistipes putredinis Bacteroidota · Rikenellaceae | 15,443 | 0 | |
 Candidatus Cibiobacter qucibialis Bacillota | 15,285 | 0 | |
 Blautia massiliensis (ex Durand et al. 2017) Bacillota · Lachnospiraceae | 15,176 | 0 | |
 Waltera acetigignens Bacillota · Lachnospiraceae | 15,161 | 0 | |
 Oscillibacter valericigenes Bacillota · Oscillospiraceae | 14,988 | 0 | |
 Gemmiger formicilis Bacillota · Oscillospiraceae | 14,882 | 0 | |
 Dorea formicigenerans Bacillota · Lachnospiraceae | 14,865 | 0 | |
 Streptococcus salivarius Bacillota · Streptococcaceae | 14,842 | 34 | |
 Escherichia coli Pseudomonadota · Enterobacteriaceae | 14,839 | 0 | |
 Roseburia faecis Bacillota · Lachnospiraceae | 14,837 | 0 | |
 Clostridium fessum Bacillota · Clostridiaceae | 14,718 | 0 | |
 Lachnospira pectinoschiza Bacillota · Lachnospiraceae | 14,692 | 0 | |
 Bilophila wadsworthia Thermodesulfobacteriota · Desulfovibrionaceae | 14,411 | 0 | |
 Alistipes onderdonkii Bacteroidota · Rikenellaceae | 14,224 | 0 | |
 [Ruminococcus] torques Bacillota · Lachnospiraceae | 14,190 | 0 | |
 Parabacteroides merdae Bacteroidota · Tannerellaceae | 14,115 | 0 | |
 Odoribacter splanchnicus Bacteroidota · Odoribacteraceae | 14,098 | 0 | |
 Bacteroides caccae Bacteroidota · Bacteroidaceae | 14,078 | 0 | |
 Collinsella aerofaciens Actinomycetota · Coriobacteriaceae | 14,053 | 0 | |
 Ruminococcus bromii Bacillota · Oscillospiraceae | 14,012 | 0 | |
 Mediterraneibacter faecis Bacillota · Lachnospiraceae | 13,962 | 0 | |
 Roseburia hominis Bacillota · Lachnospiraceae | 13,947 | 0 | |
 Lachnospira eligens Bacillota · Lachnospiraceae | 13,907 | 0 | |
 Coprococcus comes Bacillota · Lachnospiraceae | 13,826 | 0 | |
 Bacteroides xylanisolvens Bacteroidota · Bacteroidaceae | 13,732 | 0 | |
 Alistipes shahii Bacteroidota · Rikenellaceae | 13,514 | 0 | |
 Anaerobutyricum hallii Bacillota · Lachnospiraceae | 13,491 | 2 | |
 Lacrimispora amygdalina Bacillota · Lachnospiraceae | 13,102 | 0 | |
 Gallintestinimicrobium propionicum Bacillota · Lachnospiraceae | 13,016 | 0 | |
 Phocaeicola dorei Bacteroidota · Bacteroidaceae | 12,489 | 0 | |
 Lawsonibacter asaccharolyticus Bacillota · Oscillospiraceae | 12,482 | 0 | |
 Bacteroides stercoris Bacteroidota · Bacteroidaceae | 12,071 | 0 | |
 Vescimonas coprocola Bacillota · Oscillospiraceae | 11,786 | 0 | |
 Enterocloster bolteae Bacillota · Lachnospiraceae | 11,709 | 0 | |
 Ruminococcus bicirculans (ex Wegman et al. 2014) Bacillota · Oscillospiraceae | 11,696 | 0 | |
 Roseburia intestinalis Bacillota · Lachnospiraceae | 11,670 | 0 | |
 Eggerthella lenta Actinomycetota · Eggerthellaceae | 11,499 | 0 | |
 Bacteroides fragilis Bacteroidota · Bacteroidaceae | 11,390 | 0 | |
 Coprococcus catus Bacillota · Lachnospiraceae | 11,375 | 0 | |
 Eubacterium ramulus Bacillota · Eubacteriaceae | 11,330 | 0 | |
 Blautia glucerasea Bacillota · Lachnospiraceae | 11,047 | 0 | |
 Streptococcus parasanguinis Bacillota · Streptococcaceae | 11,044 | 0 | |
 Hominenteromicrobium mulieris Bacillota · Oscillospiraceae | 10,732 | 0 | |
 Simiaoa sunii Bacillota · Lachnospiraceae | 10,706 | 0 | |
 Faecalibacillus intestinalis Bacillota · Coprobacillaceae | 10,685 | 0 | |
 Alistipes finegoldii Bacteroidota · Rikenellaceae | 10,646 | 0 | |
 Anaerotignum faecicola Bacillota · Anaerotignaceae | 10,407 | 0 | |
 Bifidobacterium adolescentis Actinomycetota · Bifidobacteriaceae | 10,367 | 13 | |
 [Clostridium] leptum Bacillota · Oscillospiraceae | 10,324 | 0 | |
 Barnesiella intestinihominis Bacteroidota · Barnesiellaceae | 10,270 | 0 | |
 Alistipes communis Bacteroidota · Rikenellaceae | 10,222 | 0 | |
 Phascolarctobacterium faecium Bacillota · Acidaminococcaceae | 10,122 | 0 | |
 Eubacterium ventriosum Bacillota · Eubacteriaceae | 9,921 | 0 | |
 Oliverpabstia intestinalis Bacillota · Lachnospiraceae | 9,915 | 0 | |
 Romboutsia timonensis Bacillota · Peptostreptococcaceae | 9,772 | 0 | |
 Anaerobutyricum soehngenii Bacillota · Lachnospiraceae | 9,574 | 0 | |
 Faecalicatena fissicatena Bacillota · Lachnospiraceae | 9,505 | 0 | |
 Parasutterella excrementihominis Pseudomonadota · Sutterellaceae | 9,458 | 0 | |
 Akkermansia muciniphila Verrucomicrobiota · Akkermansiaceae | 9,381 | 12 | |
 Enterocloster hominis (ex Liu et al. 2021) Bacillota · Lachnospiraceae | 9,210 | 0 | |
 Adlercreutzia equolifaciens Actinomycetota · Eggerthellaceae | 9,183 | 0 | |
 Fusicatenibacter faecihominis Bacillota · Lachnospiraceae | 9,083 | 0 | |
 Hydrogenoanaerobacterium saccharovorans Bacillota · Oscillospiraceae | 9,057 | 0 | |
 Evtepia gabavorous Bacillota | 8,928 | 0 | |
 Segatella copri Bacteroidota · Prevotellaceae | 8,908 | 0 | |
 Bacteroides cellulosilyticus Bacteroidota · Bacteroidaceae | 8,805 | 0 | |
 Sutterella wadsworthensis Pseudomonadota · Sutterellaceae | 8,653 | 0 | |
 [Clostridium] innocuum Bacillota · Clostridiaceae | 8,645 | 0 | |
 Intestinibacter bartlettii Bacillota · Peptostreptococcaceae | 8,565 | 0 | |
 Bifidobacterium pseudocatenulatum Actinomycetota · Bifidobacteriaceae | 8,523 | 0 | |
 Streptococcus thermophilus Bacillota · Streptococcaceae | 8,076 | 553 | |
 Lentihominibacter faecis Bacillota · Anaerovoracaceae | 8,024 | 0 | |
 Hungatella hathewayi Bacillota · Lachnospiraceae | 7,945 | 0 | |
 Veillonella parvula Bacillota · Veillonellaceae | 7,931 | 0 | |
 Phocaeicola massiliensis Bacteroidota · Bacteroidaceae | 7,748 | 0 | |
 Coprococcus eutactus Bacillota · Lachnospiraceae | 7,725 | 0 | |
 [Eubacterium] siraeum Bacillota · Oscillospiraceae | 7,704 | 0 | |
 [Ruminococcus] lactaris Bacillota · Lachnospiraceae | 7,661 | 0 | |
 Dialister invisus Bacillota · Veillonellaceae | 7,524 | 0 | |
 Alistipes indistinctus Bacteroidota · Rikenellaceae | 7,331 | 0 | |
 Enterocloster citroniae Bacillota · Lachnospiraceae | 7,304 | 0 | |
 Alistipes ihumii Bacteroidota · Rikenellaceae | 7,246 | 0 | |
 [Clostridium] symbiosum Bacillota · Lachnospiraceae | 7,190 | 0 | |
 Enterocloster aldenensis Bacillota · Lachnospiraceae | 7,174 | 0 | |
 Thomasclavelia ramosa Bacillota · Coprobacillaceae | 7,172 | 0 | |
 Mediterraneibacter butyricigenes Bacillota · Lachnospiraceae | 6,882 | 0 | |
 Faecalibacterium wellingii Bacillota · Oscillospiraceae | 6,766 | 0 | |
 Intestinimonas butyriciproducens Bacillota | 6,759 | 0 | |
 Holdemania filiformis Bacillota · Erysipelotrichaceae | 6,671 | 0 | |
 Faecalibacterium butyricigenerans Bacillota · Oscillospiraceae | 6,568 | 0 | |
 Lachnospira hominis (ex Liu et al. 2021) Bacillota · Lachnospiraceae | 6,255 | 0 | |
 Bacteroides finegoldii Bacteroidota · Bacteroidaceae | 6,205 | 0 | |
 Anaerotruncus colihominis Bacillota · Oscillospiraceae | 6,169 | 0 | |
 Phocaeicola plebeius Bacteroidota · Bacteroidaceae | 6,067 | 0 | |
 Anaeromassilibacillus senegalensis Bacillota · Acutalibacteraceae | 6,007 | 0 | |
 Wujia chipingensis Bacillota · Lachnospiraceae | 5,919 | 0 | |
 Veillonella dispar Bacillota · Veillonellaceae | 5,838 | 0 | |
 Paraprevotella clara Bacteroidota · Prevotellaceae | 5,834 | 0 | |
 Bifidobacterium bifidum Actinomycetota · Bifidobacteriaceae | 5,813 | 1,272 | |
 Streptococcus australis Bacillota · Streptococcaceae | 5,795 | 0 | |
 Wansuia hejianensis Bacillota · Lachnospiraceae | 5,731 | 0 | |
 Merdimmobilis hominis Bacillota · Oscillospiraceae | 5,661 | 0 | |
 Bacteroides eggerthii Bacteroidota · Bacteroidaceae | 5,593 | 0 | |
 Butyricimonas virosa Bacteroidota · Odoribacteraceae | 5,555 | 0 | |
 Haemophilus parainfluenzae Pseudomonadota · Pasteurellaceae | 5,526 | 0 | |
 [Clostridium] scindens Bacillota · Lachnospiraceae | 5,524 | 0 | |
 Mediterraneibacter glycyrrhizinilyticus Bacillota · Lachnospiraceae | 5,451 | 0 | |
 Bacteroides nordii Bacteroidota · Bacteroidaceae | 5,434 | 0 | |
 Sellimonas intestinalis Bacillota · Lachnospiraceae | 5,299 | 0 | |
 Blautia caecimuris Bacillota · Lachnospiraceae | 5,275 | 0 | |
 Bacteroides intestinalis Bacteroidota · Bacteroidaceae | 5,257 | 0 | |
 Faecalicatena contorta Bacillota · Lachnospiraceae | 5,231 | 0 | |
 Veillonella atypica Bacillota · Veillonellaceae | 5,226 | 0 | |
 Ruminococcus callidus Bacillota · Oscillospiraceae | 5,144 | 0 | |
 Alistipes senegalensis Bacteroidota · Rikenellaceae | 4,924 | 0 | |
 Klebsiella pneumoniae Pseudomonadota · Enterobacteriaceae | 4,821 | 0 | |
 Phocaeicola coprocola Bacteroidota · Bacteroidaceae | 4,676 | 0 | |
 Rothia mucilaginosa Actinomycetota · Micrococcaceae | 4,642 | 0 | |
 Blautia luti Bacillota · Lachnospiraceae | 4,637 | 0 | |
 Gordonibacter pamelaeae Actinomycetota · Eggerthellaceae | 4,634 | 0 | |
 Guopingia tenuis Bacillota · Christensenellaceae | 4,615 | 0 | |
 Anaerotruncus rubiinfantis Bacillota · Oscillospiraceae | 4,603 | 0 | |
 Eisenbergiella tayi Bacillota · Lachnospiraceae | 4,508 | 0 | |
 Parabacteroides goldsteinii Bacteroidota · Tannerellaceae | 4,504 | 0 | |
 Enterocloster clostridioformis Bacillota · Lachnospiraceae | 4,482 | 0 | |
 Streptococcus mitis Bacillota · Streptococcaceae | 4,478 | 0 | |
 Bacteroides salyersiae Bacteroidota · Bacteroidaceae | 4,433 | 0 | |
 Coprobacter fastidiosus Bacteroidota · Barnesiellaceae | 4,432 | 0 | |
 Pseudoflavonifractor gallinarum Bacillota · Oscillospiraceae | 4,336 | 0 | |
 Blautia stercoris Bacillota · Lachnospiraceae | 4,284 | 0 | |
 Megamonas funiformis Bacillota · Selenomonadaceae | 4,235 | 0 | |
 Butyricimonas faecihominis Bacteroidota · Odoribacteraceae | 4,196 | 0 | |
 Pseudoflavonifractor capillosus Bacillota · Oscillospiraceae | 4,165 | 0 | |
 Thomasclavelia spiroformis Bacillota · Coprobacillaceae | 4,140 | 0 | |
 Turicibacter bilis Bacillota · Turicibacteraceae | 4,106 | 0 | |
 Enterocloster asparagiformis Bacillota · Lachnospiraceae | 4,100 | 0 | |
 Enterocloster lavalensis Bacillota · Lachnospiraceae | 4,086 | 0 | |
 [Clostridium] nexile Bacillota · Lachnospiraceae | 4,085 | 0 | |
 Intestinimonas massiliensis (ex Afouda et al. 2020) Bacillota | 4,081 | 0 | |
 Methanobrevibacter smithii Methanobacteriota · Methanobacteriaceae | 3,898 | 0 | |
 Blautia producta Bacillota · Lachnospiraceae | 3,888 | 0 | |
 Eisenbergiella massiliensis Bacillota · Lachnospiraceae | 3,877 | 0 | |
 Veillonella rogosae Bacillota · Veillonellaceae | 3,850 | 0 | |
 Holdemanella porci Bacillota · Erysipelotrichaceae | 3,784 | 0 | |
 Massilioclostridium coli Bacillota · Clostridiaceae | 3,767 | 0 | |
 Butyricimonas paravirosa Bacteroidota · Odoribacteraceae | 3,739 | 0 | |
 Bacteroides faecis Bacteroidota · Bacteroidaceae | 3,706 | 0 | |
 Allisonella histaminiformans Bacillota · Veillonellaceae | 3,692 | 0 | |
 Zhenpiania hominis Bacillota · Anaerovoracaceae | 3,615 | 0 | |
 Roseburia lenta Bacillota · Lachnospiraceae | 3,534 | 0 | |
 Bacteroides clarus Bacteroidota · Bacteroidaceae | 3,529 | 0 | |
 Schaalia odontolytica Actinomycetota · Actinomycetaceae | 3,497 | 0 | |
 Senegalimassilia anaerobia Actinomycetota · Coriobacteriaceae | 3,490 | 0 | |
 Faecalimonas umbilicata Bacillota · Lachnospiraceae | 3,489 | 0 | |
 Negativibacillus massiliensis Bacillota | 3,487 | 0 | |
 Blautia hansenii Bacillota · Lachnospiraceae | 3,453 | 0 | |
 Bittarella massiliensis (ex Durand et al. 2017) Bacillota · Oscillospiraceae | 3,445 | 0 | |
 Clostridium saudiense Bacillota · Clostridiaceae | 3,443 | 0 | |
 Anaerosacchariphilus hominis Bacillota · Lachnospiraceae | 3,433 | 0 | |
 Hydrogeniiclostridium mannosilyticum Bacillota · Acutalibacteraceae | 3,429 | 0 | |
 Neobittarella massiliensis (ex Bilen et al. 2018) Bacillota · Oscillospiraceae | 3,290 | 0 | |
 Monoglobus pectinilyticus Bacillota · Monoglobaceae | 3,279 | 0 | |
 Phascolarctobacterium succinatutens Bacillota · Acidaminococcaceae | 3,200 | 0 | |
 Alistipes dispar Bacteroidota · Rikenellaceae | 3,184 | 0 | |
 Leyella stercorea Bacteroidota · Prevotellaceae | 3,175 | 0 | |
 Hominifimenecus microfluidus Bacillota · Lachnospiraceae | 3,139 | 0 | |
 Desulfovibrio piger Thermodesulfobacteriota · Desulfovibrionaceae | 3,128 | 0 | |
 Slackia isoflavoniconvertens Actinomycetota · Eggerthellaceae | 3,071 | 0 | |
 Massiliimalia timonensis Bacillota · Oscillospiraceae | 3,035 | 0 | |
 Lawsonibacter hominis Bacillota · Oscillospiraceae | 3,033 | 0 | |
 Longicatena caecimuris Bacillota · Erysipelotrichaceae | 3,023 | 0 | |
 Holdemania massiliensis Bacillota · Erysipelotrichaceae | 3,002 | 0 | |
 Massilimicrobiota timonensis Bacillota · Erysipelotrichaceae | 2,998 | 0 | |
 Anaerostipes caccae Bacillota · Lachnospiraceae | 2,997 | 0 | |
 Intestinimonas gabonensis Bacillota | 2,953 | 0 | |
 Faecalibacillus faecis Bacillota · Coprobacillaceae | 2,832 | 0 | |
 Bifidobacterium dentium Actinomycetota · Bifidobacteriaceae | 2,771 | 0 | |
 Coprobacillus cateniformis Bacillota · Coprobacillaceae | 2,745 | 0 | |
 Blautia faecicola Bacillota · Lachnospiraceae | 2,737 | 0 | |
 Coprobacter secundus Bacteroidota · Barnesiellaceae | 2,733 | 0 | |
 Streptococcus gordonii Bacillota · Streptococcaceae | 2,720 | 0 | |
 Candidatus Borkfalkia ceftriaxoniphila Bacillota · Christensenellaceae | 2,676 | 0 | |
 Streptococcus anginosus Bacillota · Streptococcaceae | 2,663 | 0 | |
 Bifidobacterium catenulatum Actinomycetota · Bifidobacteriaceae | 2,651 | 0 | |
 Bifidobacterium breve Actinomycetota · Bifidobacteriaceae | 2,645 | 713 | |
 Provencibacterium massiliense Bacillota · Oscillospiraceae | 2,611 | 0 | |
 Jutongia hominis Bacillota · Lachnospiraceae | 2,605 | 0 | |
 Mogibacterium diversum Bacillota · Anaerovoracaceae | 2,604 | 0 | |
 Dielma fastidiosa Bacillota · Erysipelotrichaceae | 2,594 | 0 | |
 Actinomyces graevenitzii Actinomycetota · Actinomycetaceae | 2,585 | 0 | |
 Dialister hominis Bacillota · Veillonellaceae | 2,528 | 0 | |
 Acidaminococcus intestini Bacillota · Acidaminococcaceae | 2,525 | 0 | |
 Blautia hydrogenotrophica Bacillota · Lachnospiraceae | 2,513 | 0 | |
 Lactococcus lactis Bacillota · Streptococcaceae | 2,510 | 219 | |
 Victivallis lenta Lentisphaerota · Victivallaceae | 2,509 | 0 | |
 Streptococcus sanguinis Bacillota · Streptococcaceae | 2,501 | 0 | |
 Actinomyces oris Actinomycetota · Actinomycetaceae | 2,494 | 0 | |
 Streptococcus vestibularis Bacillota · Streptococcaceae | 2,467 | 0 | |
 Christensenella hongkongensis Bacillota · Christensenellaceae | 2,445 | 0 | |
 Streptococcus oralis Bacillota · Streptococcaceae | 2,444 | 0 | |
 Enterococcus faecium Bacillota · Enterococcaceae | 2,414 | 49 | |
 Anaerofilum hominis Bacillota · Oscillospiraceae | 2,364 | 0 | |
 Christensenella minuta Bacillota · Christensenellaceae | 2,360 | 0 | |
 Parabacteroides johnsonii Bacteroidota · Tannerellaceae | 2,353 | 0 | |
 Youxingia wuxianensis Bacillota · Oscillospiraceae | 2,327 | 0 | |
 Pseudoflavonifractor phocaeensis Bacillota · Oscillospiraceae | 2,312 | 0 | |
 Allofournierella massiliensis Bacillota · Oscillospiraceae | 2,308 | 0 | |
 Lentihominibacter hominis Bacillota · Anaerovoracaceae | 2,267 | 0 | |
 Enterococcus faecalis Bacillota · Enterococcaceae | 2,243 | 13 | |
 Gordonibacter urolithinfaciens Actinomycetota · Eggerthellaceae | 2,239 | 0 | |
 Holdemanella biformis Bacillota · Erysipelotrichaceae | 2,224 | 0 | |
 Gemella sanguinis Bacillota · Gemellaceae | 2,206 | 0 | |
 Massiliimalia massiliensis Bacillota · Oscillospiraceae | 2,204 | 0 | |
 Ellagibacter isourolithinifaciens Actinomycetota · Eggerthellaceae | 2,192 | 0 | |
 Catenibacillus scindens Bacillota · Lachnospiraceae | 2,188 | 0 | |
 Anaerofustis stercorihominis Bacillota · Eubacteriaceae | 2,065 | 0 | |
 Clostridium lentum Bacillota · Clostridiaceae | 2,030 | 0 | |
 Roseburia zhanii Bacillota · Lachnospiraceae | 1,999 | 0 | |
 Diplocloster agilis Bacillota · Lachnospiraceae | 1,966 | 0 | |
 Merdimonas faecis Bacillota · Lachnospiraceae | 1,957 | 0 | |
 Pseudoruminococcus massiliensis Bacillota · Acutalibacteraceae | 1,916 | 0 | |
 Bifidobacterium animalis Actinomycetota · Bifidobacteriaceae | 1,915 | 1,443 | |
 Mesosutterella multiformis Pseudomonadota · Sutterellaceae | 1,890 | 0 | |
 Turicibacter sanguinis Bacillota · Turicibacteraceae | 1,887 | 0 | |
 Enterocloster hominis (ex Hitch et al. 2024) Bacillota · Clostridiaceae | 1,859 | 0 | |
 [Eubacterium] sulci Bacillota · Anaerovoracaceae | 1,857 | 0 | |
 Bianquea renquensis Bacillota · Bianqueaceae | 1,851 | 0 | |
 Luoshenia tenuis Bacillota · Christensenellaceae | 1,848 | 0 | |
 Ligaoa zhengdingensis Bacillota · Oscillospiraceae | 1,830 | 0 | |
 Anaerotruncus massiliensis (ex Togo et al. 2019) Bacillota · Oscillospiraceae | 1,819 | 0 | |
 Neglectibacter timonensis Bacillota · Oscillospiraceae | 1,805 | 0 | |
 Lactonifactor longoviformis Bacillota · Clostridiaceae | 1,722 | 0 | |
 Clostridium perfringens Bacillota · Clostridiaceae | 1,710 | 0 | |
 Victivallis vadensis Lentisphaerota · Victivallaceae | 1,693 | 0 | |
 Enterobacter hormaechei Pseudomonadota · Enterobacteriaceae | 1,649 | 0 | |
 Jingyaoa shaoxingensis Bacillota · Lachnospiraceae | 1,649 | 0 | |
 Streptococcus mutans Bacillota · Streptococcaceae | 1,639 | 0 | |
 Anaerotignum lactatifermentans Bacillota · Anaerotignaceae | 1,638 | 0 | |
 Mediterraneibacter massiliensis Bacillota · Lachnospiraceae | 1,636 | 0 | |
 [Clostridium] methylpentosum Bacillota · Oscillospiraceae | 1,610 | 0 | |
 Klebsiella variicola Pseudomonadota · Enterobacteriaceae | 1,602 | 0 | |
 Yeguia hominis Bacillota · Yeguiaceae | 1,571 | 0 | |
 Claveliimonas bilis Bacillota · Lachnospiraceae | 1,544 | 0 | |
 Lancefieldella parvula Actinomycetota · Atopobiaceae | 1,523 | 0 | |
 Actinomyces bouchesdurhonensis Actinomycetota · Actinomycetaceae | 1,513 | 0 | |
 Vescimonas fastidiosa Bacillota · Oscillospiraceae | 1,501 | 0 | |
 [Eubacterium] hominis Bacillota · Erysipelotrichaceae | 1,496 | 0 | |
 Streptococcus rubneri Bacillota · Streptococcaceae | 1,496 | 0 | |
 Lawsonibacter faecis Bacillota · Oscillospiraceae | 1,481 | 0 | |
 Butyricimonas faecalis Bacteroidota · Odoribacteraceae | 1,475 | 0 | |
 Phocaeicola coprophilus Bacteroidota · Bacteroidaceae | 1,462 | 0 | |
 Fusobacterium mortiferum Fusobacteriota · Fusobacteriaceae | 1,449 | 0 | |
 Collinsella intestinalis Actinomycetota · Coriobacteriaceae | 1,427 | 0 | |
 Segatella hominis Bacteroidota · Prevotellaceae | 1,423 | 0 | |
 Lactobacillus gasseri Bacillota · Lactobacillaceae | 1,410 | 377 | |
 Collinsella bouchesdurhonensis Actinomycetota · Coriobacteriaceae | 1,394 | 0 | |
 Ruminococcus bovis Bacillota · Oscillospiraceae | 1,384 | 0 | |
 Paratractidigestivibacter faecalis Actinomycetota · Atopobiaceae | 1,383 | 0 | |
 Massilistercora timonensis Bacillota | 1,382 | 0 | |
 Butyricimonas synergistica Bacteroidota · Odoribacteraceae | 1,366 | 0 | |
 Megasphaera micronuciformis Bacillota · Veillonellaceae | 1,362 | 0 | |
 Ligilactobacillus salivarius Bacillota · Lactobacillaceae | 1,353 | 754 | |
 Raoultibacter timonensis Actinomycetota · Eggerthellaceae | 1,351 | 0 | |
 Phocaeicola sartorii Bacteroidota · Bacteroidaceae | 1,335 | 0 | |
 Amedibacillus dolichus Bacillota · Erysipelotrichaceae | 1,329 | 0 | |
 Citrobacter freundii Pseudomonadota · Enterobacteriaceae | 1,313 | 0 | |
 Lachnoclostridium edouardi Bacillota · Lachnospiraceae | 1,304 | 0 | |
 Emergencia timonensis Bacillota · Anaerovoracaceae | 1,301 | 0 | |
 Angelakisella massiliensis Bacillota · Oscillospiraceae | 1,271 | 0 | |
 Enterobacter roggenkampii Pseudomonadota · Enterobacteriaceae | 1,271 | 0 | |
 Blautia schinkii Bacillota · Lachnospiraceae | 1,251 | 0 | |
 Actinomyces naeslundii Actinomycetota · Actinomycetaceae | 1,226 | 0 | |
 Eshraghiella crossota Bacillota · Lachnospiraceae | 1,193 | 0 | |
 Eubacterium callanderi Bacillota · Eubacteriaceae | 1,191 | 0 | |
 Oxalobacter formigenes Pseudomonadota · Oxalobacteraceae | 1,191 | 0 | |
 Prevotella marseillensis Bacteroidota · Prevotellaceae | 1,184 | 0 | |
 Butyricicoccus intestinisimiae Bacillota · Butyricicoccaceae | 1,178 | 0 | |
 Klebsiella quasipneumoniae Pseudomonadota · Enterobacteriaceae | 1,176 | 0 | |
 Jutongia huaianensis Bacillota · Lachnospiraceae | 1,163 | 0 | |
 Lacticaseibacillus paracasei Bacillota · Lactobacillaceae | 1,159 | 747 | |
 Megasphaera massiliensis Bacillota · Veillonellaceae | 1,155 | 0 | |
 Limosilactobacillus fermentum Bacillota · Lactobacillaceae | 1,150 | 177 | |
 Streptococcus cristatus Bacillota · Streptococcaceae | 1,144 | 0 | |
 Enterococcus avium Bacillota · Enterococcaceae | 1,135 | 0 | |
 Streptococcus gallolyticus Bacillota · Streptococcaceae | 1,113 | 0 | |
 Diplocloster modestus Bacillota · Lachnospiraceae | 1,111 | 0 | |
 Limosilactobacillus mucosae Bacillota · Lactobacillaceae | 1,108 | 0 | |
 Citrobacter portucalensis Pseudomonadota · Enterobacteriaceae | 1,068 | 0 | |
 Sanguibacteroides justesenii Bacteroidota · Porphyromonadaceae | 1,068 | 0 | |
 Fusobacterium nucleatum Fusobacteriota · Fusobacteriaceae | 1,048 | 0 | |
 Lactobacillus delbrueckii Bacillota · Lactobacillaceae | 1,044 | 604 | |
 Prevotella corporis Bacteroidota · Prevotellaceae | 1,044 | 0 | |
 Feifania hominis Bacillota · Feifaniaceae | 1,039 | 0 | |
 Faecalitalea cylindroides Bacillota · Erysipelotrichaceae | 1,023 | 0 | |
 Longibaculum muris Bacillota · Coprobacillaceae | 1,023 | 0 | |
 Gemella morbillorum Bacillota · Gemellaceae | 1,021 | 0 | |
 Mogibacterium kristiansenii Bacillota · Anaerovoracaceae | 1,020 | 0 | |
 Veillonella tobetsuensis Bacillota · Veillonellaceae | 1,010 | 0 | |
 Lacticaseibacillus rhamnosus Bacillota · Lactobacillaceae | 1,004 | 1,504 | |
 Clostridium paraputrificum Bacillota · Clostridiaceae | 1,002 | 0 | |
 Enterobacter kobei Pseudomonadota · Enterobacteriaceae | 996 | 0 | |
 Cloacibacillus evryensis Synergistota · Synergistaceae | 977 | 0 | |
 Duodenibacillus massiliensis Pseudomonadota · Sutterellaceae | 976 | 0 | |
 Ligilactobacillus ruminis Bacillota · Lactobacillaceae | 974 | 0 | |
 Thomasclavelia saccharogumia Bacillota · Coprobacillaceae | 971 | 0 | |
 Desulfovibrio fairfieldensis Thermodesulfobacteriota · Desulfovibrionaceae | 967 | 0 | |
 Parvimonas micra Bacillota · Peptoniphilaceae | 967 | 0 | |
 Amedibacterium intestinale Bacillota · Erysipelotrichaceae | 958 | 0 | |
 Granulicatella adiacens Bacillota · Carnobacteriaceae | 928 | 0 | |
 Actinomyces dentalis Actinomycetota · Actinomycetaceae | 923 | 0 | |
 Prevotella bivia Bacteroidota · Prevotellaceae | 923 | 0 | |
 Alistipes timonensis Bacteroidota · Rikenellaceae | 922 | 0 | |
 Parabacteroides gordonii Bacteroidota · Tannerellaceae | 917 | 0 | |
 Cloacibacillus porcorum Synergistota · Synergistaceae | 890 | 0 | |
 Collinsella tanakaei Actinomycetota · Coriobacteriaceae | 888 | 0 | |
 Escherichia marmotae Pseudomonadota · Enterobacteriaceae | 887 | 0 | |
 Fusobacterium ulcerans Fusobacteriota · Fusobacteriaceae | 885 | 0 | |
 Yanshouia hominis Bacillota · Oscillospiraceae | 852 | 0 | |
 Fumia xinanensis Bacillota · Oscillospiraceae | 851 | 0 | |
 Weissella confusa Bacillota · Lactobacillaceae | 844 | 0 | |
 Klebsiella michiganensis Pseudomonadota · Enterobacteriaceae | 833 | 0 | |
 Oscillibacter hominis Bacillota · Oscillospiraceae | 830 | 0 | |
 Prevotellamassilia timonensis Bacteroidota · Prevotellaceae | 829 | 0 | |
 Lachnoclostridium phocaeense Bacillota · Lachnospiraceae | 825 | 0 | |
 Dorea phocaeensis Bacillota · Lachnospiraceae | 821 | 0 | |
 Jilunia laotingensis Bacteroidota · Bacteroidaceae | 802 | 0 | |
 Peptostreptococcus stomatis Bacillota · Peptostreptococcaceae | 801 | 0 | |
 Bacteroides bouchesdurhonensis Bacteroidota · Bacteroidaceae | 800 | 0 | |
 Enterocloster alcoholdehydrogenati Bacillota · Lachnospiraceae | 798 | 0 | |
 Pyramidobacter piscolens Synergistota · Dethiosulfovibrionaceae | 796 | 0 | |
 Alistipes provencensis Bacteroidota · Rikenellaceae | 793 | 0 | |
 Congzhengia minquanensis Bacillota · Oscillospiraceae | 790 | 0 | |
 Raoultella ornithinolytica Pseudomonadota · Enterobacteriaceae | 786 | 0 | |
 Dialister pneumosintes Bacillota · Veillonellaceae | 783 | 0 | |
 Cuneatibacter caecimuris Bacillota · Lachnospiraceae | 777 | 0 | |
 Desulfovibrio desulfuricans Thermodesulfobacteriota · Desulfovibrionaceae | 769 | 0 | |
 Streptococcus lutetiensis Bacillota · Streptococcaceae | 768 | 0 | |
 Corynebacterium durum Actinomycetota · Corynebacteriaceae | 766 | 0 | |
 Prevotella dentalis Bacteroidota · Prevotellaceae | 764 | 0 | |
 Hoylesella timonensis Bacteroidota · Prevotellaceae | 754 | 0 | |
 Parabacteroides faecis Bacteroidota · Tannerellaceae | 745 | 0 | |
 Scardovia wiggsiae Actinomycetota · Bifidobacteriaceae | 742 | 0 | |
 Streptococcus constellatus Bacillota · Streptococcaceae | 734 | 0 | |
 Finegoldia magna Bacillota · Peptoniphilaceae | 733 | 0 | |
 Enorma massiliensis Actinomycetota · Coriobacteriaceae | 723 | 0 | |
 Senegalimassilia faecalis Actinomycetota · Coriobacteriaceae | 720 | 0 | |
 Weissella cibaria Bacillota · Lactobacillaceae | 714 | 0 | |
 Raoultibacter massiliensis Actinomycetota · Eggerthellaceae | 710 | 0 | |
 Enterobacter asburiae Pseudomonadota · Enterobacteriaceae | 695 | 0 | |
 Brotaphodocola catenula Bacillota · Lachnospiraceae | 694 | 0 | |
 Bacillus subtilis Bacillota · Bacillaceae | 691 | 458 | |
 Mitsuokella jalaludinii Bacillota · Selenomonadaceae | 689 | 0 | |
 Anaerococcus obesiensis Bacillota · Peptoniphilaceae | 688 | 0 | |
 Enterobacter ludwigii Pseudomonadota · Enterobacteriaceae | 686 | 0 | |
 Lactococcus cremoris Bacillota · Streptococcaceae | 679 | 0 | |
 Gehongia tenuis Bacillota · Christensenellaceae | 677 | 0 | |
 Clostridioides difficile Bacillota · Peptostreptococcaceae | 668 | 0 | |
 Frisingicoccus caecimuris Bacillota · Lachnospiraceae | 664 | 0 | |
 Odoribacter laneus Bacteroidota · Odoribacteraceae | 659 | 0 | |
 Catenibacterium mitsuokai Bacillota · Coprobacillaceae | 649 | 0 | |
 Enterococcus gallinarum Bacillota · Enterococcaceae | 645 | 0 | |
 Hoylesella buccalis Bacteroidota · Prevotellaceae | 645 | 0 | |
 Leuconostoc lactis Bacillota · Lactobacillaceae | 640 | 11 | |
 Paraprevotella xylaniphila Bacteroidota · Prevotellaceae | 625 | 0 | |
 Solobacterium moorei Bacillota · Erysipelotrichaceae | 620 | 0 | |
 Faecalicoccus pleomorphus Bacillota · Erysipelotrichaceae | 618 | 0 | |
 Eggerthella sinensis Actinomycetota · Eggerthellaceae | 609 | 0 | |
 Bifidobacterium angulatum Actinomycetota · Bifidobacteriaceae | 604 | 0 | |
 Parabacteroides faecalis Bacteroidota · Tannerellaceae | 604 | 0 | |
 Citrobacter braakii Pseudomonadota · Enterobacteriaceae | 602 | 0 | |
 Faecalicatena orotica Bacillota · Lachnospiraceae | 601 | 0 | |
 Prevotella disiens Bacteroidota · Prevotellaceae | 598 | 0 | |
 Parasutterella secunda Pseudomonadota · Sutterellaceae | 596 | 0 | |
 Streptococcus infantis Bacillota · Streptococcaceae | 591 | 0 | |
 Megasphaera elsdenii Bacillota · Veillonellaceae | 587 | 0 | |
 Klebsiella aerogenes Pseudomonadota · Enterobacteriaceae | 586 | 0 | |
 Enterococcus casseliflavus Bacillota · Enterococcaceae | 578 | 0 | |
 Schaalia turicensis Actinomycetota · Actinomycetaceae | 577 | 0 | |
 Drancourtella massiliensis Bacillota · Oscillospiraceae | 570 | 0 | |
 Clostridium neonatale Bacillota · Clostridiaceae | 566 | 0 | |
 Mitsuokella multacida Bacillota · Selenomonadaceae | 564 | 0 | |
 Actinomyces massiliensis Actinomycetota · Actinomycetaceae | 563 | 0 | |
 Bacteroides congonensis Bacteroidota · Bacteroidaceae | 560 | 0 | |
 Prevotella merdae Bacteroidota · Prevotellaceae | 560 | 0 | |
 Anaerovorax odorimutans Bacillota · Anaerovoracaceae | 555 | 0 | |
 Alloscardovia omnicolens Actinomycetota · Bifidobacteriaceae | 554 | 0 | |
 Fusobacterium varium Fusobacteriota · Fusobacteriaceae | 553 | 0 | |
 Lactobacillus acidophilus Bacillota · Lactobacillaceae | 552 | 2,602 | |
 Dialister succinatiphilus Bacillota · Veillonellaceae | 550 | 0 | |
 Leyella lascolaii Bacteroidota · Prevotellaceae | 543 | 0 | |
 Parolsenella catena Actinomycetota · Atopobiaceae | 538 | 0 | |
 Clostridium celatum Bacillota · Clostridiaceae | 520 | 0 | |
 Prevotella pectinovora Bacteroidota · Prevotellaceae | 519 | 0 | |
 Proteus mirabilis Pseudomonadota · Morganellaceae | 509 | 0 | |
 Lactobacillus crispatus Bacillota · Lactobacillaceae | 508 | 28 | |
 Varibaculum cambriense Actinomycetota · Actinomycetaceae | 505 | 0 | |
 [Clostridium] hylemonae Bacillota · Lachnospiraceae | 504 | 0 | |
 Haemophilus sputorum Pseudomonadota · Pasteurellaceae | 503 | 0 | |
 Parabacteroides hominis Bacteroidota · Tannerellaceae | 499 | 0 | |
 Streptococcus infantarius Bacillota · Streptococcaceae | 496 | 0 | |
 Klebsiella oxytoca Pseudomonadota · Enterobacteriaceae | 491 | 0 | |
 Acidaminococcus massiliensis Bacillota · Acidaminococcaceae | 490 | 0 | |
 Lactiplantibacillus plantarum Bacillota · Lactobacillaceae | 490 | 1,402 | |
 Ruminococcus champanellensis Bacillota · Oscillospiraceae | 487 | 0 | |
 Clostridium cuniculi Bacillota · Clostridiaceae | 486 | 0 | |
 Morganella morganii Pseudomonadota · Morganellaceae | 486 | 0 | |
 Veillonella ratti Bacillota · Veillonellaceae | 477 | 0 | |
 Dakarella massiliensis Pseudomonadota · Sutterellaceae | 467 | 0 | |
 Lactococcus petauri Bacillota · Streptococcaceae | 465 | 0 | |
 Luxibacter massiliensis Bacillota · Lachnospiraceae | 461 | 0 | |
 Slackia piriformis Actinomycetota · Eggerthellaceae | 457 | 0 | |
 Fenollaria timonensis Bacillota | 455 | 0 | |
 [Bacteroides] pectinophilus Bacillota | 450 | 0 | |
 Peptostreptococcus anaerobius Bacillota · Peptostreptococcaceae | 450 | 0 | |
 Blautia argi Bacillota · Lachnospiraceae | 449 | 0 | |
 Campylobacter hominis Campylobacterota · Campylobacteraceae | 449 | 0 | |
 Eubacterium limosum Bacillota · Eubacteriaceae | 449 | 0 | |
 Segatella buccae Bacteroidota · Prevotellaceae | 449 | 0 | |
 Intestinimonas timonensis Bacillota | 446 | 0 | |
 Rubneribacter badeniensis Actinomycetota · Eggerthellaceae | 441 | 0 | |
 Beduinella massiliensis Bacillota · Beduinellaceae | 435 | 0 | |
 Gardnerella vaginalis Actinomycetota · Bifidobacteriaceae | 435 | 0 | |
 Klebsiella grimontii Pseudomonadota · Enterobacteriaceae | 433 | 0 | |
 Methanosphaera stadtmanae Methanobacteriota · Methanobacteriaceae | 433 | 0 | |
 Gemella haemolysans Bacillota · Gemellaceae | 430 | 0 | |
 Propionibacterium acidifaciens Actinomycetota · Propionibacteriaceae | 427 | 0 | |
 Peptoniphilus lacrimalis Bacillota · Peptoniphilaceae | 423 | 0 | |
 Staphylococcus aureus Bacillota · Staphylococcaceae | 423 | 0 | |
 Fenollaria massiliensis Bacillota | 422 | 0 | |
 Turicimonas muris Pseudomonadota · Sutterellaceae | 420 | 0 | |
 Lancefieldella rimae Actinomycetota · Atopobiaceae | 418 | 0 | |
 Maliibacterium massiliense Bacillota · Maliibacteriaceae | 412 | 0 | |
 Porphyromonas uenonis Bacteroidota · Porphyromonadaceae | 411 | 0 | |
 Staphylococcus epidermidis Bacillota · Staphylococcaceae | 406 | 0 | |
 Blautia marasmi Bacillota · Lachnospiraceae | 404 | 0 | |
 Pauljensenia hongkongensis Actinomycetota · Actinomycetaceae | 402 | 0 | |
 Clostridium disporicum Bacillota · Clostridiaceae | 400 | 0 | |
 Zhenhengia yiwuensis Bacillota · Lachnospiraceae | 400 | 0 | |
 Actinomyces johnsonii Actinomycetota · Actinomycetaceae | 399 | 0 | |
 Candidatus Nanoperiomorbus periodonticus Candidatus Saccharimonadota · Candidatus Nanoperiomorbaceae | 398 | 0 | |
 Murimonas intestini Bacillota · Lachnospiraceae | 398 | 0 | |
 Streptococcus intermedius Bacillota · Streptococcaceae | 391 | 0 | |
 Peptoniphilus harei Bacillota · Peptoniphilaceae | 390 | 0 | |
 Fusobacterium periodonticum Fusobacteriota · Fusobacteriaceae | 388 | 0 | |
 Clostridium butyricum Bacillota · Clostridiaceae | 386 | 7 | |
 Actinomyces gerencseriae Actinomycetota · Actinomycetaceae | 384 | 0 | |
 Christensenella tenuis Bacillota · Christensenellaceae | 384 | 0 | |
 Massilicoli timonensis Bacillota · Erysipelotrichaceae | 380 | 0 | |
 Comamonas kerstersii Pseudomonadota · Comamonadaceae | 377 | 0 | |
 Qingrenia yutianensis Bacillota · Oscillospiraceae | 376 | 0 | |
 Schaalia meyeri Actinomycetota · Actinomycetaceae | 376 | 0 | |
 [Eubacterium] brachy Bacillota · Anaerovoracaceae | 375 | 0 | |
 Bacteroides cutis Bacteroidota · Bacteroidaceae | 374 | 0 | |
 Collinsella stercoris Actinomycetota · Coriobacteriaceae | 374 | 0 | |
 Neisseria subflava Pseudomonadota · Neisseriaceae | 372 | 0 | |
 Leuconostoc mesenteroides Bacillota · Lactobacillaceae | 369 | 17 | |
 Ruminococcus gauvreauii Bacillota · Oscillospiraceae | 367 | 0 | |
 Alistipes montrealensis Bacteroidota · Rikenellaceae | 365 | 0 | |
 Christensenella timonensis Bacillota · Christensenellaceae | 365 | 0 | |
 Parabacteroides massiliensis Bacteroidota · Tannerellaceae | 365 | 0 | |
 Aggregatibacter segnis Pseudomonadota · Pasteurellaceae | 363 | 0 | |
 Porphyromonas somerae Bacteroidota · Porphyromonadaceae | 363 | 0 | |
 Campylobacter concisus Campylobacterota · Campylobacteraceae | 354 | 0 | |
 Levyella massiliensis Bacillota | 353 | 0 | |
 Christensenella intestinihominis Bacillota · Christensenellaceae | 351 | 0 | |
 Kluyvera ascorbata Pseudomonadota · Enterobacteriaceae | 350 | 0 | |
 Thermophilibacter provencensis Actinomycetota · Atopobiaceae | 349 | 0 | |
 Pediococcus acidilactici Bacillota · Lactobacillaceae | 347 | 50 | |
 Acidaminococcus fermentans Bacillota · Acidaminococcaceae | 343 | 0 | |
 Marseilla massiliensis Bacteroidota · Prevotellaceae | 343 | 0 | |
 Streptococcus sobrinus Bacillota · Streptococcaceae | 337 | 0 | |
 Leuconostoc citreum Bacillota · Lactobacillaceae | 336 | 0 | |
 Enterobacter cloacae Pseudomonadota · Enterobacteriaceae | 335 | 0 | |
 Enteroscipio rubneri Actinomycetota · Eggerthellaceae | 333 | 0 | |
 Streptococcus lactarius Bacillota · Streptococcaceae | 332 | 0 | |
 Desulfovibrio legallii Thermodesulfobacteriota · Desulfovibrionaceae | 327 | 0 | |
 Bifidobacterium pullorum Actinomycetota · Bifidobacteriaceae | 326 | 0 | |
 Limosilactobacillus oris Bacillota · Lactobacillaceae | 324 | 0 | |
 Sutterella seckii Pseudomonadota · Sutterellaceae | 324 | 0 | |
 Terrisporobacter mayombei Bacillota · Peptostreptococcaceae | 320 | 0 |
Showing 1–500 of 2,435 Show 50 more