Meta-analysis NPJ biofilms and microbiomes · 2025 Unravelling novel microbial players in the breast tissue of TNBC patients: a meta-analytic perspective. Rashwan HH, Marzouk NH, Youness RA, et al. Anaerobutyricum soehngeniiGemmiger formicilis PubMed ↗
Observational Pathogens · 2024 Longitudinal Fecal Microbiota Profiles in A Cohort of Non-Hospitalized Adolescents and Young Adults with COVID-19: Associations with SARS-CoV-2 Status and Long-Term Fatigue. Olbjørn C, Hagen M, Moen AEF, et al. Faecalibacterium prausnitziiGemmiger formicilisStreptococcus thermophilusSutterella wadsworthensis PubMed ↗
Clinical trial Clinical gastroenterology and hepatology · 2024 Fecal Microbiota Transplantation for Sleep Disturbance in Post-acute COVID-19 Syndrome. Lau RI, Su Q, Ching JYL, et al. Gemmiger formicilis PubMed ↗
Randomized trial Food & function · 2022 Changes in the intestinal microbiota of healthy adults induced by brown yogurt and relationships of bacterial taxa with specific components. Jiang TM, Liang Y, Liu B, et al. Akkermansia muciniphilaCoprococcus eutactusFaecalibacterium prausnitziiGemmiger formicilis +2 more PubMed ↗
Observational Microbiome · 2021 Signature changes in gut microbiome are associated with increased susceptibility to HIV-1 infection in MSM. Chen Y, Lin H, Cole M, et al. [Ruminococcus] torquesAkkermansia muciniphilaAlistipes onderdonkiiAlistipes putredinis +8 more PubMed ↗
Pharmacological research · 2026 Prospective associations of tea consumption with skeletal muscle mass and strength: Insights from the gut microbiome and proteomics. Hong Z, Lu Z, Shi R, et al. Gemmiger formicilis PubMed ↗
Microbial cell factories · 2026 Fecal microbiota fermenting simple organic carbon substrates in vitro as microbial factories capable of distinguishing Crohn's disease from healthy states. Detman-Ignatowska A, Schiro G, Filip R, et al. [Ruminococcus] torquesAgathobacter rectalisCoprococcus catusEscherichia coli +2 more PubMed ↗
Diabetes care · 2026 Intake of Fiber From Different Food Sources and Type 2 Diabetes Risk: An Integrated Analysis of Epidemiological and Multiomic Data. Wan Y, Alessa HB, Guasch-Ferré M, et al. [Ruminococcus] lactarisFaecalibacterium prausnitziiGemmiger formicilis PubMed ↗
Scientific reports · 2026 Changes in gut microbiota composition following water kefir consumption in healthy adults. de Mel R, Al Khafaji AH, Muthusamy S, et al. Bacteroides fragilisBacteroides uniformisGemmiger formicilisParabacteroides distasonis +2 more PubMed ↗
Experimental biology and medicine · 2026 The effect of short-term consumption of Bifidobacterium bifidum on the gut microbiome of obese individuals. Burakova I, Smirnova Y, Morozova P, et al. Bifidobacterium bifidumAlistipes putredinisAlistipes shahiiBacteroides uniformis +2 more PubMed ↗
Comprehensive physiology · 2025 Metagenomic Profiling of Gut Microbiota in Kidney Precision Medicine Project Participants With CKD and AKI. Noel S, Patel SK, White J, et al. Dorea longicatenaGemmiger formicilisRoseburia hominisRoseburia intestinalis PubMed ↗
Annals of the rheumatic diseases · 2025 Short-chain fatty acids and their gut microbial pathways distinguish rheumatoid arthritis in discordant monozygotic twins. Blank RB, Bu K, Zhang X, et al. Blautia faecisFaecalicatena fissicatenaGemmiger formicilis PubMed ↗
Microbiology spectrum · 2025 Unraveling the interplay between mesenchymal stem cells, gut microbiota, and systemic sclerosis: therapeutic implications. Zhang L, Wang H, Zhao L, et al. Akkermansia muciniphilaGemmiger formicilisParasutterella excrementihominis PubMed ↗
The journal of headache and pain · 2024 Microbiota alterations are related to migraine food triggers and inflammatory markers in chronic migraine patients with medication overuse headache. Vuralli D, Ceren Akgor M, Dagidir HG, et al. Clostridium fessumDorea longicatenaGemmiger formicilis PubMed ↗
Nutrients · 2024 Self-Initiated Dietary Adjustments Alter Microbiota Abundances: Implications for Perceived Health. Willems A, Sura-de Jong M, Klaassens E, et al. Gemmiger formicilisRuminococcus bromii PubMed ↗
Genes & genomics · 2024 Gut Microbiome and colorectal cancer: discovery of bacterial changes with metagenomics application in Turkısh population. Ulger Y, Delik A, Akkız H Gemmiger formicilisRuminococcus bromiiSegatella copri PubMed ↗
Journal of medical virology · 2024 Multikingdom characterization of gut microbiota in patients with rheumatoid arthritis and rheumatoid arthritis-associated interstitial lung disease. Xing Y, Liu Y, Sha S, et al. Bifidobacterium longumCollinsella aerofaciensDorea formicigeneransFaecalibacterium prausnitzii +4 more PubMed ↗
International journal of biological macromolecules · 2024 Gut microbiota modulation, prebiotic and bioactive characteristics of date pomace polysaccharides extracted by microwave-assisted deep eutectic solvent. Bamigbade GB, Subhash AJ, Al-Ramadi B, et al. Bifidobacterium longumCollinsella aerofaciensGemmiger formicilis PubMed ↗
Revista alergia Mexico · 2024 [Faecal microbiota study reveals specific dysbiosis in spondyloarthritis according to subtype, disease activity and treatment]. Romero-Sánchez C, Ferrer-Santos C, Abril D, et al. Alistipes indistinctusAlistipes putredinisBacteroides eggerthiiGemmiger formicilis +2 more PubMed ↗
Nature communications · 2023 Microbiome and metabolome features in inflammatory bowel disease via multi-omics integration analyses across cohorts. Ning L, Zhou YL, Sun H, et al. Gemmiger formicilisThomasclavelia ramosa PubMed ↗
Clinical nutrition · 2023 Gut microbiota alterations induced by intensive chemotherapy in acute myeloid leukaemia patients are associated with gut barrier dysfunction and body weight loss. Pötgens SA, Lecop S, Havelange V, et al. Enterococcus faeciumGemmiger formicilisOdoribacter splanchnicus PubMed ↗
International journal of molecular sciences · 2023 Lacticaseibacillus rhamnosus ATCC 53103 and Limosilactobacillus reuteri ATCC 53608 Synergistically Boost Butyrate Levels upon Tributyrin Administration Ex Vivo. Van den Abbeele P, Goggans M, Deyaert S, et al. Agathobacter rectalisCoprococcus catusGemmiger formicilis PubMed ↗
Oxidative medicine and cellular longevity · 2022 Gut Microbiome and Plasma Metabolomic Analysis in Patients with Myelodysplastic Syndrome. Jiang H, Zhao X, Zang M, et al. Enterocloster citroniaeGemmiger formicilisHaemophilus parainfluenzaeSegatella copri PubMed ↗
Cells · 2021 Microbiome Analysis of Mucosal Ileoanal Pouch in Ulcerative Colitis Patients Revealed Impairment of the Pouches Immunometabolites. Palmieri O, Castellana S, Biscaglia G, et al. [Ruminococcus] torquesBlautia obeumDorea formicigeneransFaecalibacterium prausnitzii +1 more PubMed ↗
Nutrients · 2021 Influence of Short-Term Consumption of Hericium erinaceus on Serum Biochemical Markers and the Changes of the Gut Microbiota: A Pilot Study. Xie XQ, Geng Y, Guan Q, et al. Agathobacter rectalisBacteroides caccaeFaecalibacterium prausnitziiFusicatenibacter saccharivorans +3 more PubMed ↗
Frontiers in microbiology · 2026 A data-driven universal gut microbiome health assessment: a machine learning framework trained on large metagenomic data. Kumar B, Lorusso E, Fosso B, et al. Gemmiger formicilisKlebsiella pneumoniaeRuthenibacterium lactatiformansSutterella wadsworthensis PubMed ↗
Probiotics and antimicrobial proteins · 2026 Combined Probiotics and Phenolics in Western Diet-fed Rats Enhance Parasympathetic Tone in the Gut-Brain Axis by Attenuating Inflammasome Signaling, and Reshaping Gut Microbiome. Cruz Neto JPR, Godet M, da Costa PCT, et al. Blautia gluceraseaFlavonifractor plautiiGemmiger formicilisRomboutsia timonensis +1 more PubMed ↗
Bioscience of microbiota, food and health · 2025 An altered gut microbiota is associated with anthropometric and biochemical changes in a prediabetes Mexican cohort. Suárez-Sánchez F, Alvarado-Vera LF, Tremaroli V, et al. Bifidobacterium bifidumGemmiger formicilis PubMed ↗
Frontiers in pharmacology · 2025 Effect of herbal medicine Bojungikgi-tang on gut microbiome and symptoms in anorexic patients with atopic dermatitis: a randomized controlled trial. Lee B, Ko MM, Ahn YM, et al. Gemmiger formicilis PubMed ↗
Gut pathogens · 2025 Thomasclavelia ramosa and alcohol-related hepatocellular carcinoma: a microbial culturomics study. Magdy Wasfy R, Abdoulaye A, Borentain P, et al. Thomasclavelia ramosaGemmiger formicilisMediterraneibacter gnavus PubMed ↗
Journal of clinical medicine · 2025 Intestinal Microbiota Composition in Patients with Type 2 Diabetes and Effects of Oral Antidiabetics. Kalkan AT, Yorulmaz G, Akalin A, et al. Alistipes finegoldiiCollinsella aerofaciensFaecalibacterium prausnitziiGemmiger formicilis +1 more PubMed ↗
Life · 2025 The Effect of the Ideal Food Pyramid on Gut Microbiota in Rheumatoid Arthritis Patients. Kaçar Mutlutürk Ü, Çiçek B, Cengiz G Akkermansia muciniphilaBacteroides fragilisBacteroides ovatusBacteroides uniformis +7 more PubMed ↗
Frontiers in microbiology · 2025 Changes in the gut microbiome due to diarrhea in neonatal Korean indigenous calves. Ku JY, Lee MJ, Jung Y, et al. Collinsella aerofaciensFaecalibacterium prausnitziiGemmiger formicilis PubMed ↗
Nature and science of sleep · 2024 Associations of Intermittent Hypoxia Burden with Gut Microbiota Dysbiosis in Adult Patients with Obstructive Sleep Apnea. Guo W, Sun L, Yue H, et al. Gemmiger formicilis PubMed ↗
Frontiers in microbiology · 2024 Gut microbiota from patients with Parkinson's disease causes motor deficits in honeybees. Zeng J, Li Y, Yan J, et al. Blautia obeumCollinsella aerofaciensDorea longicatenaGemmiger formicilis +1 more PubMed ↗
Frontiers in nutrition · 2022 Beneficial Effects of a Low-Glycemic Diet on Serum Metabolites and Gut Microbiota in Obese Women With Prevotella and Bacteriodes Enterotypes: A Randomized Clinical Trial. Hur HJ, Wu X, Yang HJ, et al. Bifidobacterium longumCollinsella aerofaciensGemmiger formicilis PubMed ↗
Antioxidants · 2021 Vitamin C Supplementation in Healthy Individuals Leads to Shifts of Bacterial Populations in the Gut-A Pilot Study. Otten AT, Bourgonje AR, Peters V, et al. Gemmiger formicilisStreptococcus thermophilus PubMed ↗
Animal study Poultry science · 2024 Free-caged rearing modes regulate chicken intestinal metabolism by influencing gut microbial homeostasis. Li T, Wang P, Zhi Z, et al. Gemmiger formicilis PubMed ↗
Animal study Frontiers in immunology · 2021 Dietary Taxifolin Protects Against Dextran Sulfate Sodium-Induced Colitis via NF-κB Signaling, Enhancing Intestinal Barrier and Modulating Gut Microbiota. Hou J, Hu M, Zhang L, et al. Gemmiger formicilisThomasclavelia ramosa PubMed ↗