Agrobacterium tumefaciens: its interactions
Everything we hold for this microbe: the microbes it lives with, the metabolites it eats and makes, life factors and health. Click any dot to centre the map on it.
Microbes 11
- Bifidobacterium adolescentis Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium dentium Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium longum Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Clostridioides difficile Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Clostridium sporogenes Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Escherichia coli Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lacticaseibacillus rhamnosus Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Levilactobacillus brevis Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Pseudomonas aeruginosa Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Pseudomonas fluorescens Microbes Recorded only Recorded as making the 4-aminobutyrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Pseudomonas putida Microbes Recorded only Recorded as making the nitrate A. tumefaciens uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
Metabolites 32
- Cellobiose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (81 species), so it doesn't link microbes on its own.Open its map
- D-arabinose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Open its map
- D-gluconate (Entner-Doudoroff pathway) Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- D-ribose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (49 species), so it doesn't link microbes on its own.Open its map
- Fructose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own.Open its map
- Galactose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (76 species), so it doesn't link microbes on its own.Open its map
- Glucose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Open its map
- L-alanine Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- L-aspartate Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- L-fucose Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- L-glutamate Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- L-lyxose Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- L-rhamnose Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsMetabolites · Eats Recorded only 1 of 1 strainOpen its map
- Lactate Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Metabolites · Makes From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Open its map
- Mannose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Open its map
- Melibiose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (39 species), so it doesn't link microbes on its own.Open its map
- N-acetylglucosamine Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- Pyruvate Metabolites · Eats From genomes (AGORA2) 3 of 3 strainsOpen its map
- Raffinose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own.Open its map
- Xylose Metabolites · Eats From genomes (AGORA2) 3 of 3 strains Made or used by most gut microbes we hold (55 species), so it doesn't link microbes on its own.Open its map
- 4-Aminobutyrate Metabolites · Eats Recorded only Papers say yesOpen its map
- Amygdalin Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Citrate Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- CO2 Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (43 species), so it doesn't link microbes on its own.Open its map
- Esculin Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Ethanol Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (46 species), so it doesn't link microbes on its own.Open its map
- Myo-inositol Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Nitrate Metabolites · Eats Recorded only 1 of 1 strainMetabolites · Eats Recorded only Papers say yesOpen its map
- Nitrite Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Sodium thiosulfate Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Sucrose Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own.Open its map
- Urea Metabolites · Eats Recorded only 1 of 1 strainOpen its map
6 metabolites it can't eat
Inulin
Resistant starch
Starch
Pectin
Lactose
Gut mucus
21 metabolites it can't make
Butyrate
Propionate
Succinate
Formate
Secondary bile acids
Thiamin