Interactions › Pseudomonas putida

Pseudomonas putida: its interactions

Everything we hold for this microbe: the microbes it lives with, the metabolites it eats and makes, life factors and health. Click any dot to centre the map on it.

Microbes 25

  • Campylobacter ureolyticus
    Microbes Recorded only Recorded as able to use the nitrate and nitrite P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Kingella denitrificans
    Microbes Recorded only Recorded as able to use the nitrate and nitrite P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Moraxella catarrhalis
    Microbes Recorded only Recorded as able to use the nitrate and nitrite P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Acidovorax delafieldii
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Agrobacterium tumefaciens
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Anaerostipes caccae
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Anaerostipes hadrus
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bacillus subtilis
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bilophila wadsworthia
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bradyrhizobium japonicum
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Candida tropicalis
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Cetobacterium somerae
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Clostridium celatum
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Clostridium sartagoforme
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Corynebacterium ammoniagenes
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Corynebacterium glutamicum
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Desulfovibrio desulfuricans
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Ectopseudomonas mendocina
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Enterococcus faecalis
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Escherichia coli
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Hyphomicrobium denitrificans
    Microbes Recorded only Recorded as able to use the nitrate P. putida makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Klebsiella pneumoniae
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Pseudomonas aeruginosa
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Staphylococcus aureus
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Streptococcus pneumoniae
    Microbes Recorded only Recorded as making the formaldehyde P. putida uses. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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Metabolites 51

  • Glucose
    Metabolites · Eats Recorded only 56 of 59 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • Gluconate
    Metabolites · Eats Recorded only 55 of 57 strains BacDive lab tests
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  • Decanoate
    Metabolites · Eats Recorded only 54 of 54 strains BacDive lab tests
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  • Malate
    Metabolites · Eats Recorded only 54 of 55 strains BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Arginine
    Metabolites · Eats Recorded only 51 of 57 strains BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • D-mannose
    Metabolites · Eats Recorded only 30 of 55 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own. BacDive lab tests
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  • 2-oxoglutarate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Ammonia
    Metabolites · Makes From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Butyrate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • Citrate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 12 of 17 strains BacDive lab tests
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  • D-gluconate (Entner-Doudoroff pathway)
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Fructose
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • Fumarate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Glycerol
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Isovalerate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-alanine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-asparagine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-aspartate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-glutamate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-histidine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-leucine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-lysine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 2 of 7 strains BacDive lab tests
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  • L-ornithine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-phenylalanine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-proline
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • L-tyrosine
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Lactate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Makes From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • Propionate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • Pyruvate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Genome analysis (AGORA2) Oct 2026
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  • Succinate
    Metabolites · Eats From genomes (AGORA2) 19 of 19 strains Made or used by most gut microbes we hold (64 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
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  • D-arabinose
    Metabolites · Eats Recorded only 16 of 57 strains Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own. BacDive lab tests
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  • D-mannitol
    Metabolites · Eats Recorded only 12 of 58 strains Made or used by most gut microbes we hold (47 species), so it doesn't link microbes on its own. BacDive lab tests
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  • Nitrate
    Metabolites · Eats Recorded only 9 of 68 strains BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 372 Oct 2026
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 372 Oct 2026
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  • N-acetylglucosamine
    Metabolites · Eats Recorded only 5 of 56 strains BacDive lab tests
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  • Malonate
    Metabolites · Eats Recorded only 4 of 4 strains BacDive lab tests
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  • Phenol
    Metabolites · Eats Recorded only 3 of 3 strains BacDive lab tests
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  • Adipate
    Metabolites · Eats Recorded only 2 of 56 strains BacDive lab tests
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  • Gelatin
    Metabolites · Eats Recorded only 2 of 57 strains BacDive lab tests
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  • Maltose
    Metabolites · Eats Recorded only 2 of 57 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own. BacDive lab tests
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  • Triglyceride
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 60NJC19 ref 64 Oct 2026
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  • 2-dehydro-d-gluconate
    Metabolites · Eats Recorded only 1 of 1 strain BacDive lab tests
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  • Beta-alanine
    Metabolites · Eats Recorded only 1 of 1 strain BacDive lab tests
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  • DNA RNA Polynucleotide
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 52 Oct 2026
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  • Esculin
    Metabolites · Eats Recorded only 1 of 68 strains BacDive lab tests
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  • Formaldehyde
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 332 Oct 2026
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  • Glycine
    Metabolites · Eats Recorded only 1 of 1 strain BacDive lab tests
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  • Myo-inositol
    Metabolites · Eats Recorded only 1 of 8 strains BacDive lab tests
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  • Nitrite
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 372 Oct 2026
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  • Trehalose
    Metabolites · Eats Recorded only 1 of 6 strains Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own. BacDive lab tests
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  • Urea
    Metabolites · Eats Recorded only 1 of 58 strains BacDive lab tests
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  • Valine
    Metabolites · Eats Recorded only 1 of 1 strain BacDive lab tests
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6 metabolites it can't eat Genome analysis (AGORA2)
Inulin Its genomes can't eat it· 0 of 19 genomes
Resistant starch Its genomes can't eat it· 0 of 19 genomes
Starch Its genomes can't eat it· 0 of 19 genomes
Pectin Its genomes can't eat it· 0 of 19 genomes
Lactose Its genomes can't eat it· 0 of 19 genomes
Gut mucus Its genomes can't eat it· 0 of 19 genomes
Nothing found isn't proof of no link: a study can miss a small difference.
21 metabolites it can't make Genome analysis (AGORA2)
Butyrate Its genomes can't make it· 0 of 19 genomes
Propionate Its genomes can't make it· 0 of 19 genomes
Succinate Its genomes can't make it· 0 of 19 genomes
Formate Its genomes can't make it· 0 of 19 genomes
Secondary bile acids Its genomes can't make it· 0 of 19 genomes
Thiamin Its genomes can't make it· 0 of 19 genomes
and 15 more Nothing found isn't proof of no link: a study can miss a small difference.

Life factors 0

3 diets compared, nothing found Studies whose tables list every microbe they tested
Omnivore Compared, no clear difference· Fackelmann 2025
Vegan Compared, no clear difference· Fackelmann 2025
Vegetarian Compared, no clear difference· Fackelmann 2025
Nothing found isn't proof of no link: a study can miss a small difference.

+10 more recorded (can use what it releases)