Escherichia coli: its interactions
Everything we hold for this microbe: the microbes it lives with, the metabolites it eats and makes, life factors and health. Click any dot to centre the map on it.
Microbes 34
- Bacillus subtilis Microbes Recorded only Recorded as able to use the 4-aminobutyrate, biotin and 3 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the vitamin b6 E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium bifidum Microbes Recorded only Recorded as making the chenodeoxycholic acid, cholic acid and 3 more compounds E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as able to use the biotin, menaquinone and riboflavin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium breve Microbes Recorded only Recorded as making the chenodeoxycholic acid, cholic acid and 3 more compounds E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium longum Microbes Recorded only Recorded as making the chenodeoxycholic acid, cholic acid and 3 more compounds E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as able to use the biotin, menaquinone and riboflavin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Enterococcus faecalis Microbes Recorded only Recorded as able to use the biotin, folate and 3 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lacticaseibacillus paracasei Microbes Recorded only Recorded as able to use the biotin, folate and 3 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactococcus lactis Microbes Recorded only Recorded as able to use the biotin, folate and 3 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactobacillus delbrueckii Microbes Recorded only Recorded as able to use the folate, niacin and 2 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Leuconostoc mesenteroides Microbes Recorded only Recorded as able to use the biotin, folate and 2 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Staphylococcus aureus Microbes Recorded only Recorded as able to use the biotin, niacin and 2 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Streptococcus equinus Microbes Recorded only Recorded as able to use the biotin, l-threonine and 2 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Streptococcus salivarius Microbes Recorded only Recorded as able to use the biotin, niacin and 2 more compounds E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium adolescentis Microbes Recorded only Recorded as making the chenodeoxycholic acid, cholic acid and vitamin b6 E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as able to use the biotin, menaquinone and riboflavin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Brucella abortus Microbes Recorded only Recorded as able to use the biotin, niacin and thiamine E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Enterococcus faecium Microbes Recorded only Recorded as able to use the biotin, folate and niacin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Klebsiella pneumoniae Microbes Recorded only Recorded as able to use the methanol, niacin and vitamin b12 E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactobacillus acidophilus Microbes Recorded only Recorded as able to use the biotin, niacin and riboflavin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Levilactobacillus brevis Microbes Recorded only Recorded as able to use the folate, niacin and thiamine E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Ligilactobacillus salivarius Microbes Recorded only Recorded as able to use the folate, niacin and riboflavin E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Listeria monocytogenes Microbes Recorded only Recorded as able to use the biotin, riboflavin and thiamine E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Ruminococcus bromii Microbes Recorded only Recorded as able to use the biotin, riboflavin and vitamin b12 E. coli makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides fragilis Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium animalis Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Clostridium perfringens Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactiplantibacillus plantarum Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactobacillus gasseri Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactobacillus helveticus Microbes Recorded only Recorded as making the thiamine and vitamin b6 E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lactobacillus johnsonii Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Lentilactobacillus buchneri Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Phocaeicola vulgatus Microbes Recorded only Recorded as making the chenodeoxycholic acid and cholic acid E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Streptococcus thermophilus Microbes Recorded only Recorded as making the thiamine and vitamin b6 E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Akkermansia muciniphila Microbes Recorded only Recorded as making the sulfate E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides caccae Microbes Recorded only Recorded as making the fumarate E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides intestinalis Microbes Recorded only Recorded as making the fumarate E. coli uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
Metabolites 90
- Ammonia Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsOpen its map
- Biotin Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Cadaverine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Cobalamin Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsOpen its map
- D-Fructuronate Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- D-gluconate (Entner-Doudoroff pathway) Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsOpen its map
- D-glucuronic acid Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- D-maltose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 16 of 16 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Open its map
- D-Tagaturonate Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- Dimethylamine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Folate Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Formaldehyde Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- GABA Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsOpen its map
- Glucose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 290 of 294 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Open its map
- Hydrogen Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsOpen its map
- Indole-3-acetate Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- L-arabinose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 225 of 290 strains Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Open its map
- L-Idonate Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- L-lysine Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only 219 of 284 strainsOpen its map
- L-threonine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Lactate Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Metabolites · Makes From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Open its map
- Lactose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 15 of 18 strains Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own.Open its map
- Mannitol Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (47 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 236 of 289 strains Made or used by most gut microbes we hold (47 species), so it doesn't link microbes on its own.Open its map
- Mannose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 12 of 12 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Open its map
- Menaquinone Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Niacin Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesMetabolites · Makes Recorded only Papers say yesOpen its map
- Phenylacetate Metabolites · Eats From genomes (AGORA2) 981 of 981 strainsOpen its map
- Propionate Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own.Open its map
- Putrescine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Riboflavin Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Succinate Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (64 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (64 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (64 species), so it doesn't link microbes on its own.Open its map
- Thiamine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Eats Recorded only Papers say yesMetabolites · Makes Recorded only Papers say yesOpen its map
- Trehalose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 16 of 16 strains Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own.Open its map
- Trimethylamine Metabolites · Makes From genomes (AGORA2) 981 of 981 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Xylose Metabolites · Eats From genomes (AGORA2) 981 of 981 strains Made or used by most gut microbes we hold (55 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 9 of 11 strains Made or used by most gut microbes we hold (55 species), so it doesn't link microbes on its own.Open its map
- Tryptophan Metabolites · Eats Recorded only 287 of 290 strainsOpen its map
- L-rhamnose Metabolites · Eats Recorded only 275 of 288 strainsOpen its map
- D-sorbitol Metabolites · Eats Recorded only 251 of 291 strainsOpen its map
- Melibiose Metabolites · Eats Recorded only 171 of 281 strains Made or used by most gut microbes we hold (39 species), so it doesn't link microbes on its own.Metabolites · Eats From genomes (AGORA2) 29 of 981 strains Made or used by most gut microbes we hold (39 species), so it doesn't link microbes on its own.Open its map
- N-acetylneuraminic acid Metabolites · Eats From genomes (AGORA2) 29 of 981 strainsOpen its map
- Ornithine Metabolites · Eats Recorded only 21 of 293 strainsOpen its map
- Nitrate Metabolites · Eats Recorded only 19 of 19 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- Sucrose Metabolites · Eats Recorded only 19 of 295 strains Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own.Open its map
- Fructose Metabolites · Eats Recorded only 12 of 12 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own.Open its map
- Gluconate Metabolites · Eats Recorded only 12 of 12 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- N-acetylglucosamine Metabolites · Eats Recorded only 12 of 12 strainsOpen its map
- D-fucose Metabolites · Eats Recorded only 11 of 11 strainsMetabolites · Eats From genomes (AGORA2) 5 of 981 strainsOpen its map
- D-ribose Metabolites · Eats Recorded only 11 of 11 strains Made or used by most gut microbes we hold (49 species), so it doesn't link microbes on its own.Metabolites · Eats From genomes (AGORA2) 5 of 981 strains Made or used by most gut microbes we hold (49 species), so it doesn't link microbes on its own.Open its map
- Nitrite Metabolites · Eats Recorded only 11 of 17 strainsOpen its map
- D-galactose Metabolites · Eats Recorded only 10 of 11 strains Made or used by most gut microbes we hold (76 species), so it doesn't link microbes on its own.Open its map
- Glycerol Metabolites · Eats Recorded only 10 of 11 strainsOpen its map
- Amygdalin Metabolites · Eats Recorded only 9 of 290 strainsOpen its map
- Potassium 5-ketogluconate Metabolites · Eats Recorded only 9 of 15 strainsOpen its map
- Esculin Metabolites · Eats Recorded only 8 of 13 strainsOpen its map
- Galactitol Metabolites · Eats Recorded only 6 of 10 strainsOpen its map
- Butyrate Metabolites · Eats From genomes (AGORA2) 5 of 981 strains Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own.Open its map
- D-galacturonic acid Metabolites · Eats Recorded only 5 of 5 strainsOpen its map
- Arbutin Metabolites · Eats Recorded only 3 of 8 strainsOpen its map
- Formate Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own.Open its map
- Malate Metabolites · Eats Recorded only 2 of 2 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- Ribitol Metabolites · Eats Recorded only 2 of 16 strainsOpen its map
- Salicin Metabolites · Eats Recorded only 2 of 7 strainsOpen its map
- 4-Aminobutyrate Metabolites · Makes Recorded only Papers say yesOpen its map
- 7-Oxodeoxycholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- 7-Oxolithocholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- Acetate Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (120 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (120 species), so it doesn't link microbes on its own.Open its map
- Chenodeoxycholic acid Metabolites · Eats Recorded only Papers say yesOpen its map
- Cholic acid Metabolites · Eats Recorded only Papers say yesOpen its map
- Choline Metabolites · Eats From genomes (AGORA2) 1 of 981 strainsOpen its map
- Citrate Metabolites · Eats Recorded only 1 of 294 strainsOpen its map
- CO2 Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (43 species), so it doesn't link microbes on its own.Open its map
- D-arabitol Metabolites · Eats Recorded only 1 of 16 strainsOpen its map
- D-Galacturonate Metabolites · Eats Recorded only Papers say yesOpen its map
- Decanoate Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Ethanol Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (46 species), so it doesn't link microbes on its own.Open its map
- Fumarate Metabolites · Eats Recorded only Papers say yesOpen its map
- Gelatin Metabolites · Eats Recorded only 1 of 295 strainsOpen its map
- Glutamate Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- H2 Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (47 species), so it doesn't link microbes on its own.Open its map
- Indole Metabolites · Makes Recorded only Papers say yesOpen its map
- Methanol Metabolites · Makes Recorded only Papers say yesOpen its map
- Methyl beta-d-xylopyranoside Metabolites · Eats Recorded only 1 of 11 strainsOpen its map
- Myo-inositol Metabolites · Eats Recorded only 1 of 293 strainsOpen its map
- NH3 Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (44 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (44 species), so it doesn't link microbes on its own.Open its map
- Pentanol Metabolites · Makes Recorded only Papers say yesOpen its map
- Pyruvate Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Sulfate Metabolites · Eats Recorded only Papers say yesOpen its map
- Thiosulfate Metabolites · Eats Recorded only Papers say yesOpen its map
- Vitamin B12 Metabolites · Eats Recorded only Papers say yesMetabolites · Makes Recorded only Papers say yesOpen its map
- Vitamin B6 Metabolites · Eats Recorded only Papers say yesOpen its map
5 metabolites it can't eat
Inulin
Resistant starch
Starch
Pectin
Gut mucus
8 metabolites it can't make
Butyrate
Propionate
Secondary bile acids
Pyridoxine
Hydrogen sulfide
Methane
Life factors 1
- ↑ Omnivore Life factors · Food and diet Shown in a study Higher in omnivores than vegansOpen its map
2 life factors studied, nothing found
Coffee
Vegetarian
Health 6
- ↑ Colorectal cancer Health · Condition Compared within datasets · Seen again and again More common in people with itOpen its map
- ↑ Crohn's disease Health · Condition Compared within datasets · Seen again and again More common in people with itOpen its map
- ↑ Irritable bowel syndrome Health · Condition Compared within datasets · Seen more than once More common in people with itOpen its map
- ↑ Multiple sclerosis Health · Condition Compared within datasets · Seen more than once More common in people with itOpen its map
- ↑ Campylobacter infections Health · Condition Compared within datasets · Seen once More common in people with itOpen its map
- ↑ High blood pressure Health · Condition Compared within datasets · Seen once More common in people with itOpen its map
52 conditions compared, nothing found
+59 more recorded (can use what it releases)
+11 more recorded (releases what it uses)