Phocaeicola vulgatus: its interactions
Everything we hold for this microbe: the microbes it lives with, the metabolites it eats and makes, life factors and health. Click any dot to centre the map on it.
Microbes 27
- [Clostridium] hylemonae Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- [Clostridium] leptum Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- [Clostridium] scindens Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides fragilis Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides intestinalis Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bacteroides thetaiotaomicron Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Clostridium perfringens Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Escherichia coli Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Peptacetobacter hiranonis Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium adolescentis Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium bifidum Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium breve Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium dentium Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Bifidobacterium longum Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Buchnera aphidicola Microbes Recorded only Recorded as making the l-methionine P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Cutibacterium acnes Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Haemophilus parainfluenzae Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Klebsiella pneumoniae Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Limosilactobacillus reuteri Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Listeria innocua Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Mycobacterium avium Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Mycolicibacterium smegmatis Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Porphyromonas gingivalis Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Prevotella melaninogenica Microbes Recorded only Recorded as able to use the menaquinone P. vulgatus makes. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Priestia megaterium Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Propionibacterium freudenreichii Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
- Salmonella enterica Microbes Recorded only Recorded as making the vitamin b12 P. vulgatus uses. Records show both handle the same compound, not that one feeds the other in a gut.Open its map
Metabolites 59
- Ammonia Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsOpen its map
- Amylopectin Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Amylose Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Arabinoxylan Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Chenodeoxycholate Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsOpen its map
- Cholate Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsOpen its map
- CO2 Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (43 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (43 species), so it doesn't link microbes on its own.Open its map
- D-galacturonic acid Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- D-glucosamine Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- D-glucuronic acid Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- D-maltose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own.Open its map
- Deoxycholate Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsOpen its map
- Dextrin Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- Fructooligosaccharides Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Fructose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own.Open its map
- GABA Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsOpen its map
- Glucose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own.Open its map
- Glycogen Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Gut mucus Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (33 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (33 species), so it doesn't link microbes on its own.Open its map
- Inulin Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- L-arabinose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (59 species), so it doesn't link microbes on its own.Open its map
- L-rhamnose Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsMetabolites · Eats Recorded only Papers say yesOpen its map
- Lactate Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Metabolites · Makes From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own.Open its map
- Lactose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 1 of 1 strain Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own.Open its map
- Mannose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 8 of 8 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own.Open its map
- Melibiose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (39 species), so it doesn't link microbes on its own.Open its map
- Menaquinone Metabolites · Makes From genomes (AGORA2) 25 of 25 strainsMetabolites · Makes Recorded only Papers say yesOpen its map
- Propionate Metabolites · Makes From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (48 species), so it doesn't link microbes on its own.Open its map
- Raffinose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only 8 of 8 strains Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own.Open its map
- Sucrose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own.Open its map
- Xylooligosaccharides Metabolites · Eats From genomes (AGORA2) 25 of 25 strainsOpen its map
- Xylose Metabolites · Eats From genomes (AGORA2) 25 of 25 strains Made or used by most gut microbes we hold (55 species), so it doesn't link microbes on its own.Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (55 species), so it doesn't link microbes on its own.Open its map
- L-glutamate Metabolites · Eats Recorded only 4 of 8 strainsOpen its map
- Polypeptide Metabolites · Eats Recorded only Papers say yesOpen its map
- Starch Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (57 species), so it doesn't link microbes on its own.Open its map
- Xylan Metabolites · Eats Recorded only Papers say yesOpen its map
- Acetate Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (120 species), so it doesn't link microbes on its own.Open its map
- Alpha-cyclodextrin Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Arabinogalactan Metabolites · Eats Recorded only Papers say yesOpen its map
- Beta-Muricholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- Chenodeoxycholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- Cholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- D-Galacturonate Metabolites · Eats Recorded only Papers say yesOpen its map
- Deoxycholic acid Metabolites · Makes Recorded only Papers say yesOpen its map
- L-Cysteine Metabolites · Eats Recorded only Papers say yesOpen its map
- L-Fucose Metabolites · Eats Recorded only Papers say yesOpen its map
- L-Methionine Metabolites · Eats Recorded only Papers say yesOpen its map
- Mannan Metabolites · Eats Recorded only Papers say yesOpen its map
- NH3 Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (44 species), so it doesn't link microbes on its own.Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (44 species), so it doesn't link microbes on its own.Open its map
- Nitrate Metabolites · Eats Recorded only 1 of 8 strainsOpen its map
- Pectin Metabolites · Eats Recorded only Papers say yesOpen its map
- Pullulan Metabolites · Eats Recorded only 1 of 1 strainOpen its map
- Succinate Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (64 species), so it doesn't link microbes on its own.Open its map
- Tauro-b-muricholic acid Metabolites · Eats Recorded only Papers say yesOpen its map
- Taurochenodeoxycholate Metabolites · Eats Recorded only Papers say yesOpen its map
- Taurocholate Metabolites · Eats Recorded only Papers say yesOpen its map
- Taurodeoxycholate Metabolites · Eats Recorded only Papers say yesOpen its map
- Vitamin B12 Metabolites · Eats Recorded only Papers say yesOpen its map
- Xylooligosaccharides (XOS) Metabolites · Eats Recorded only Papers say yesOpen its map
1 metabolite it can't eat
Resistant starch
15 metabolites it can't make
Butyrate
Formate
Thiamin
Riboflavin
Niacin
Pyridoxine
Life factors 2
- ↓ Coffee Life factors · Food and diet Shown in a study Lower in people who drink more coffeeOpen its map
- ↑ Omnivore Life factors · Food and diet Shown in a study Higher in omnivores than vegetariansOpen its map
1 diet compared, nothing found
Vegan
Health 4
- ↓ Crohn's disease Health · Condition Compared within datasets · Seen again and again Less common in people with itOpen its map
- ↓ Cystic fibrosis Health · Condition Compared within datasets · Seen once Less common in people with itOpen its map
- ↓ Diarrhea Health · Condition Compared within datasets · Seen once Less common in people with itOpen its map
- ↓ Loss of appetite Health · Condition Compared within datasets · Seen once Less common in people with itOpen its map