Review Frontiers in immunology · 2026 Research progress on intestinal probiotics-mediated protection of the intestinal mucosal barrier in ulcerative colitis. Ma G, Deng S Akkermansia muciniphila PubMed ↗
Randomized trial mSystems · 2026 Sialidase inhibitor modulates gut microbiota and enhances mucosal protection in the treatment of ulcerative colitis. Zhao Y, Chen L, Li C, et al. Akkermansia muciniphila PubMed ↗
Observational The oncologist · 2025 Machine learning identifies a distinct microbiota signature in immune checkpoint inhibitor colitis compared with inflammatory bowel disease. Barberio B, Patuzzi I, Bertin L, et al. Bifidobacterium longum PubMed ↗
Review Molecular biology reports · 2025 The gut immune axis in ulcerative colitis: insights from microbiome research. Wasim R Escherichia coliFaecalibacterium prausnitzii PubMed ↗
Observational Gastroenterology · 2025 Structural Variations in Ulcerative Colitis-associated Escherichia coli Reduce Fructose Utilization and Aggravate Inflammation Under High-Fructose Diet. Wu X, Li Y, Li P, et al. Escherichia coli PubMed ↗
Observational Nature communications · 2024 Multi-biome analysis identifies distinct gut microbial signatures and their crosstalk in ulcerative colitis and Crohn's disease. Akiyama S, Nishijima S, Kojima Y, et al. Enterococcus faeciumEscherichia coli PubMed ↗
Randomized trial Journal of Crohn's & colitis · 2024 Gut Microbial Species and Endotypes Associate with Remission in Ulcerative Colitis Patients Treated with Anti-TNF or Anti-integrin Therapy. Tamburini FB, Tripathi A, Gold MP, et al. Faecalibacterium prausnitziiFlavonifractor plautii PubMed ↗
Meta-analysis Clinical gastroenterology and hepatology · 2024 Gut Microbiota Features in Relation to Fecal Microbiota Transplantation Outcome in Ulcerative Colitis: A Systematic Review and Meta-Analysis. Bénard MV, de Goffau MC, Blonk J, et al. Mediterraneibacter gnavusSegatella copri PubMed ↗
Observational Brazilian journal of microbiology · 2024 Bacteroides fragilis in saliva: investigating links with ulcerative colitis. Zamani S, Besharat S, Behnampour N, et al. Bacteroides fragilis PubMed ↗
Review European journal of gastroenterology & hepatology · 2024 The role of the fecal microbiota in inflammatory bowel disease. Khalaf R, Sciberras M, Ellul P Escherichia coli PubMed ↗
Observational International journal of molecular sciences · 2024 Integrated Analysis of Microbiome and Metabolome Reveals Disease-Specific Profiles in Inflammatory Bowel Diseases and Intestinal Behçet's Disease. Park Y, Ahn JB, Kim DH, et al. Bacteroides fragilis PubMed ↗
Meta-analysis Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2024 Gut microbiota-based discovery of Houttuyniae Herba as a novel prebiotic of Bacteroides thetaiotaomicron with anti-colitis activity. Zou LE, Yang YN, Zhan J, et al. Bacteroides thetaiotaomicron PubMed ↗
Observational Wiadomosci lekarskie · 2024 Differentiated approach to management of patients with irritable bowel syndrome and ulcerative colitis in non-alcoholic fatty liver disease. Sirchak YS, Kornash VV, Dutko OO, et al. Escherichia coli PubMed ↗
Observational Nutrients · 2023 Clinical Implications of Dietary Probiotic Supplement (Associated with L-Glutamine and Biotin) in Ulcerative Colitis Patients' Body Composition and Quality of Life. Pavel FM, Bungau SG, Tit DM, et al. Bifidobacterium animalisBifidobacterium longumEnterococcus faecium PubMed ↗
Randomized trial Journal of Crohn's & colitis · 2023 A Mediterranean Diet Pattern Improves Intestinal Inflammation Concomitant with Reshaping of the Bacteriome in Ulcerative Colitis: A Randomised Controlled Trial. Haskey N, Estaki M, Ye J, et al. Alistipes finegoldiiFlavonifractor plautiiRuminococcus bromii PubMed ↗
Review Gastroenterology · 2023 Pathobionts in Inflammatory Bowel Disease: Origins, Underlying Mechanisms, and Implications for Clinical Care. Gilliland A, Chan JJ, De Wolfe TJ, et al. [Clostridium] innocuumPhocaeicola vulgatus PubMed ↗
Review Anaerobe · 2023 Ruminococcus gnavus bacteremia: Literature review and a case report associated with acute flare of ulcerative colitis in an immunocompromised patient. Martínez de Victoria Carazo J, Vinuesa García D, Serrano-Conde Sánchez E, et al. Mediterraneibacter gnavus PubMed ↗
Clinical trial Microbiology spectrum · 2023 Capsulized Fecal Microbiota Transplantation Induces Remission in Patients with Ulcerative Colitis by Gut Microbial Colonization and Metabolite Regulation. Chen Q, Fan Y, Zhang B, et al. Escherichia coliOdoribacter splanchnicus PubMed ↗
Review Digestive diseases · 2023 The Role of Fecal Microbiota Transplantation in the Induction of Remission in Ulcerative Colitis. Saleh A, Parsa S, Garza M, et al. Odoribacter splanchnicus PubMed ↗
Randomized trial Alimentary pharmacology & therapeutics · 2023 Efficacy of 1-kestose supplementation in patients with mild to moderate ulcerative colitis: A randomised, double-blind, placebo-controlled pilot study. Ikegami S, Nakamura M, Honda T, et al. Mediterraneibacter gnavus PubMed ↗
Review Food & function · 2022 Probiotic Escherichia coli NISSLE 1917 for inflammatory bowel disease applications. Zhao Z, Xu S, Zhang W, et al. Escherichia coli PubMed ↗
Observational Nature microbiology · 2022 Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity. Mills RH, Dulai PS, Vázquez-Baeza Y, et al. Phocaeicola vulgatus PubMed ↗
Review Journal of immunology research · 2021 Bifidobacterium Longum: Protection against Inflammatory Bowel Disease. Yao S, Zhao Z, Wang W, et al. Bifidobacterium longum PubMed ↗
Observational Gastroenterology · 2021 Mucosal Biofilms Are an Endoscopic Feature of Irritable Bowel Syndrome and Ulcerative Colitis. Baumgartner M, Lang M, Holley H, et al. Mediterraneibacter gnavus PubMed ↗
Observational Journal of gastrointestinal and liver diseases · 2021 Gut microbiota changes in inflammatory bowel diseases and ankylosing spondilytis. Cardoneanu A, Mihai C, Rezus E, et al. [Clostridium] leptumEscherichia coliFaecalibacterium prausnitzii PubMed ↗
Cell reports · 2026 Blautia wexlerae ameliorates ulcerative colitis via metabolic remodeling of the gut microbiota. Chen Y, Long B, Liu M, et al. Blautia wexleraeFaecalibacterium butyricigenerans PubMed ↗
Food & function · 2026 Enterococcus faecium MMX derived from traditional fermented mare's milk alleviates colitis by modulating the LCN2-NLRP3 pyroptosis axis. Ma M, Bao H, Li C, et al. Enterococcus faecium PubMed ↗
PloS one · 2026 Integrative metagenomics and structural bioinformatics identify explainable gut microbial variants associated with Crohn's disease. Khan N, Nasir MM, Aziz U, et al. Agathobacter rectalisBacteroides uniformisPhocaeicola vulgatus PubMed ↗
Biomaterials · 2026 Remodeling of capsular polysaccharide enhances colonization and therapeutic efficacy of probiotic Escherichia coli against colitis. Liu X, Liu Z, Li H, et al. Escherichia coli PubMed ↗
Biochemical pharmacology · 2026 Astragalin alleviates ulcerative colitis via FPR1 inhibition and restores Microbiota-Metabolite Homeostasis: A mechanism revealed by deep learning. Zhang F, Wang C, Zuo Y, et al. Akkermansia muciniphila PubMed ↗
Frontiers in cellular and infection microbiology · 2026 Ecological patterns of the gut mycobiome and microbiome in ulcerative colitis across life stages. Toto F, Cardile S, Scanu M, et al. Faecalibacterium prausnitzii PubMed ↗
Gut · 2026 Parasutterella excrementihominis exacerbates experimental colitis and colitis-associated colorectal cancer via pathogenic NETosis activation. Tan H, Huang L, Wang J, et al. Parasutterella excrementihominis PubMed ↗
Journal of controlled release · 2026 Nanospatially confined ROS eliminator produced in situ by engineered Escherichia coli Nissle 1917 for oral treatment of inflammatory bowel disease. Chen H, Wu J, Shi Q, et al. Escherichia coli PubMed ↗
Nutrients · 2026 From Macromolecule to Microbe: Identification of Ligilactobacillus salivarius D3-8 as a Key Degrader of Ejiao and a Novel Therapeutic Probiotic for Ulcerative Colitis. Dai W, Ma M, Feng Q, et al. Ligilactobacillus salivarius PubMed ↗
Phytomedicine · 2026 Dehydroandrographolide succinate alleviates ulcerative colitis via regulating RAB9A/NF-κB axis-mediated macrophage polarization and remodeling the gut microbiota. Liu J, Mai Y, Xie Y, et al. Bacteroides intestinalis PubMed ↗
International immunopharmacology · 2026 Dihydroartemisinin alleviates ulcerative colitis by modulating gut microbiota and butyrate to restore Treg/Th17 balance and intestinal barrier function. Fan Q, Lu H, Chi X, et al. [Eubacterium] siraeum PubMed ↗
Gut microbes · 2026 A 4-guanidinobutanoic acid-SLC36A1 axis drives a microbiota‒host feedback loop to regulate intestinal homeostasis. Yang J, Xiao Y, Cui J, et al. Akkermansia muciniphila PubMed ↗
Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica · 2026 [Therapeutic effects of Baitouweng Decoction on ulcerative colitis mice with dampness-heat syndrome via inhibiting CaSR-Gq/11-MAPK signaling pathway based on fecal microbiota transplantation]. Zheng X, Ye DD, Weng XY, et al. Akkermansia muciniphila PubMed ↗
Phytomedicine · 2026 Akebia saponin D attenuates ulcerative colitis via targeting EGFR and remodeling gut microbiota homeostasis. Xu X, Fang H, Liu F, et al. Akkermansia muciniphila PubMed ↗
World journal of gastroenterology · 2025 Combined metabolomic and metagenomic analysis reveals inflammatory bowel disease diversity in pediatric and adult patients. Zakharzhevskaya NB, Erdes SI, Belousova EA, et al. Coprococcus comesStreptococcus salivariusThomasclavelia ramosa PubMed ↗
Nutrients · 2025 Protein-Calorie Malnutrition Is Associated with Altered Colonic Mucosal Microbiota in Inflammatory Bowel Disease. Yang HJ, Corson M, Aja E, et al. [Clostridium] innocuumBifidobacterium longumIntestinibacter bartlettii PubMed ↗
Journal of agricultural and food chemistry · 2025 Dominant Gut Commensals Enriched by Pectin with Low Esterification Degree Orchestrate the Amelioration of Acute Ulcerative Colitis. Tan H, Chen M, Yao H, et al. Bacteroides xylanisolvensBifidobacterium longumEnterococcus faecium PubMed ↗
ACS applied bio materials · 2025 Synergistic Therapeutic Efficacy of Engineered Probiotics Embedded in Self-Assembling Keratin Hydrogels for Ulcerative Colitis Treatment. Wen Y, Zhang C, Wang X, et al. Bifidobacterium bifidumEscherichia coliLactococcus lactis PubMed ↗
Advanced science · 2025 An Inflammation-Targeting Engineered Probiotic Escherichia coli Nissle 1917 with High Anti-TNF-α Nanobody Secretion Efficacy Alleviates Ulcerative Colitis. Hua S, Li K, Shang P, et al. Escherichia coli PubMed ↗
Journal of agricultural and food chemistry · 2025 Chronic Exposure to Sunset Yellow Promotes Susceptibility to Experimental Colitis in Mice through Gut Microbiota. Shi X, Wan L, Ni S, et al. Akkermansia muciniphila PubMed ↗
ACS applied materials & interfaces · 2025 Engineered Probiotics Secreting IL-18BP and Armed with Dual Single-Atom Catalysts for Synergistic Therapy in Ulcerative Colitis. Qiao G, Li S, Liu J, et al. Escherichia coli PubMed ↗
International journal of molecular sciences · 2025 Reactivity of Autologous Serum IgG to Gut Microbes in Pediatric Ulcerative Colitis. Tabassum N, Nakayama-Imaohji H, Munyeshyaka E, et al. Escherichia coli PubMed ↗
FASEB journal · 2025 Integrated Microbiota-Bile Acid Analysis as Potential NonInvasive Biomarkers for Ulcerative Colitis Staging Diagnose. He T, Wang Y, Zhao L, et al. [Clostridium] scindens[Clostridium] symbiosum PubMed ↗
Nature communications · 2025 Combining mucosal microbiome and host multi-omics data shows prognostic potential in paediatric ulcerative colitis. Kulecka M, O'Sullivan J, Fitzgerald R, et al. Veillonella parvula PubMed ↗
BMC medicine · 2025 Faecalibacterium prausnitzii enhances intestinal IgA response by host-microbe derived inecalcitol in colitis. Qin W, Yin N, Xu B, et al. Faecalibacterium prausnitzii PubMed ↗