Interactions › Lactobacillus johnsonii

Lactobacillus johnsonii: its interactions

Everything we hold for this microbe: the microbes it lives with, the metabolites it eats and makes, life factors and health. Click any dot to centre the map on it.

Microbes 9

  • [Clostridium] hylemonae
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • [Clostridium] leptum
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • [Clostridium] scindens
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bacteroides fragilis
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bacteroides intestinalis
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Bacteroides thetaiotaomicron
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Clostridium perfringens
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Escherichia coli
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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  • Peptacetobacter hiranonis
    Microbes Recorded only Recorded as able to use the chenodeoxycholic acid and cholic acid L. johnsonii makes. Records show both handle the same compound, not that one feeds the other in a gut. NJC19 records Oct 2026
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Metabolites 36

  • Fructose
    Metabolites · Eats Recorded only 8 of 8 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (79 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • Glucose
    Metabolites · Eats Recorded only 8 of 8 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (152 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • Sucrose
    Metabolites · Eats Recorded only 8 of 8 strains Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (103 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 242 Oct 2026
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  • Cellobiose
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (81 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 4 of 6 strains Made or used by most gut microbes we hold (81 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (81 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • Chenodeoxycholate
    Metabolites · Makes From genomes (AGORA2) 7 of 7 strains Genome analysis (AGORA2) Oct 2026
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  • Cholate
    Metabolites · Makes From genomes (AGORA2) 7 of 7 strains Genome analysis (AGORA2) Oct 2026
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  • D-maltose
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 4 of 6 strains Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (119 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 242 Oct 2026
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  • Deoxycholate
    Metabolites · Makes From genomes (AGORA2) 7 of 7 strains Genome analysis (AGORA2) Oct 2026
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  • Esculin
    Metabolites · Eats Recorded only 7 of 7 strains BacDive lab tests
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  • Galactose
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (76 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 1 of 5 strains Made or used by most gut microbes we hold (76 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (76 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 242 Oct 2026
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  • Lactate
    Metabolites · Makes From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Makes Recorded only Papers say yes Made or used by most gut microbes we hold (107 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 242 Oct 2026
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  • Lactose
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own. Genome analysis (AGORA2) Oct 2026
    Metabolites · Eats Recorded only 5 of 7 strains Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (92 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • N-acetylglucosamine
    Metabolites · Eats Recorded only 7 of 7 strains BacDive lab tests
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  • Salicin
    Metabolites · Eats From genomes (AGORA2) 7 of 7 strains Genome analysis (AGORA2) Oct 2026
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  • Trehalose
    Metabolites · Eats Recorded only 5 of 6 strains Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (56 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • D-mannose
    Metabolites · Eats Recorded only 4 of 6 strains Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (87 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 242 Oct 2026
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  • Raffinose
    Metabolites · Eats Recorded only 4 of 8 strains Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own. BacDive lab tests
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (75 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • D-tagatose
    Metabolites · Eats Recorded only 3 of 7 strains BacDive lab tests
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  • Gentiobiose
    Metabolites · Eats Recorded only 3 of 4 strains BacDive lab tests
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  • Nitrate
    Metabolites · Eats Recorded only 3 of 7 strains BacDive lab tests
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  • Acetoin
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 242 Oct 2026
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  • Chenodeoxycholic acid
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Cholic acid
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Deoxycholic acid
    Metabolites · Makes Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Dextrin
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 305 Oct 2026
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  • Glycochenodeoxycholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Glycocholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Glycodeoxycholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Glycogen
    Metabolites · Eats Recorded only 1 of 8 strains BacDive lab tests
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  • L-glutamate
    Metabolites · Eats Recorded only 1 of 1 strain BacDive lab tests
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  • Melibiose
    Metabolites · Eats Recorded only Papers say yes Made or used by most gut microbes we hold (39 species), so it doesn't link microbes on its own. NJC19 records NJC19 ref 305 Oct 2026
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  • Methyl beta-d-glucopyranoside
    Metabolites · Eats Recorded only 1 of 2 strains BacDive lab tests
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  • Starch
    Metabolites · Eats Recorded only 1 of 5 strains Made or used by most gut microbes we hold (57 species), so it doesn't link microbes on its own. BacDive lab tests
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  • Taurochenodeoxycholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Taurocholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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  • Taurodeoxycholate
    Metabolites · Eats Recorded only Papers say yes NJC19 records NJC19 ref 133 Oct 2026
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5 metabolites it can't eat Genome analysis (AGORA2)
Inulin Its genomes can't eat it· 0 of 7 genomes
Resistant starch Its genomes can't eat it· 0 of 7 genomes
Starch Its genomes can't eat it· 0 of 7 genomes
Pectin Its genomes can't eat it· 0 of 7 genomes
Gut mucus Its genomes can't eat it· 0 of 7 genomes
Nothing found isn't proof of no link: a study can miss a small difference.
20 metabolites it can't make Genome analysis (AGORA2)
Butyrate Its genomes can't make it· 0 of 7 genomes
Propionate Its genomes can't make it· 0 of 7 genomes
Succinate Its genomes can't make it· 0 of 7 genomes
Formate Its genomes can't make it· 0 of 7 genomes
Thiamin Its genomes can't make it· 0 of 7 genomes
Riboflavin Its genomes can't make it· 0 of 7 genomes
and 14 more Nothing found isn't proof of no link: a study can miss a small difference.

Life factors 0

3 diets compared, nothing found Studies whose tables list every microbe they tested
Omnivore Compared, no clear difference· Fackelmann 2025
Vegan Compared, no clear difference· Fackelmann 2025
Vegetarian Compared, no clear difference· Fackelmann 2025
Nothing found isn't proof of no link: a study can miss a small difference.

Health 1

  • ↓ Clostridium infections
    Health · Condition Compared within datasets · Seen once Less common in people with it GMrepo, compared within datasets PRJNA648321 Oct 2026
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2 conditions compared, nothing found Our analysis of GMrepo data
Colorectal cancer Compared, no clear difference· 10 studies
Chronic kidney failure Compared, no clear difference· 2 studies
1 more where datasets disagree is in its In conditions → Nothing found isn't proof of no link: a study can miss a small difference.

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