Observational Journal of cystic fibrosis · 2025 Fecal microbiota changes in people with cystic fibrosis after 6 months of elexacaftor/tezacaftor/ivacaftor: Findings from the promise study. Duong JT, Hayden HS, Verster AJ, et al. [Clostridium] scindensEscherichia coliMediterraneibacter gnavus PubMed ↗
Journal of bacteriology · 2026 A genotoxin associated with colorectal cancer linked to gut dysbiosis in children with cystic fibrosis. Barrack KE, Surve SV, de Sousa Bezerra AV, et al. Escherichia coliPhocaeicola vulgatus PubMed ↗
Microbiology spectrum · 2026 The regional landscape of the human colon culturome in health and cystic fibrosis. Surve SV, Valls RA, Barrack KE, et al. Bacteroides fragilis PubMed ↗
Journal of cystic fibrosis · 2026 Parallel metagenomic- and culture-based approaches show nasal swabs are a good proxy for broncho-alveolar lavage in children with cystic fibrosis. FitzGerald JA, Lester KL, O' Sullivan N, et al. Escherichia coli PubMed ↗
Journal of pediatric gastroenterology and nutrition · 2024 Premodulator microbiome alterations associated with postmodulator growth outcomes in pediatric cystic fibrosis: Can we predict outcomes? Sanville J, O'Toole GA, Madan J, et al. Bacteroides stercoris PubMed ↗
Journal of cystic fibrosis · 2024 Alterations in the fecal microbiota in patients with advanced cystic fibrosis liver disease after 6 months of elexacaftor/tezacaftor/ivacaftor. Duong JT, Pope CE, Hayden HS, et al. Streptococcus salivariusVeillonella parvula PubMed ↗
Physiological genomics · 2023 Fecal dysbiosis and inflammation in intestinal-specific Cftr knockout mice on regimens preventing intestinal obstruction. Young SM, Woode RA, Williams EC, et al. Mediterraneibacter gnavus PubMed ↗
Microbiology spectrum · 2023 An oral commensal attenuates Pseudomonas aeruginosa-induced airway inflammation and modulates nitrite flux in respiratory epithelium. Baty JJ, Stoner SN, McDaniel MS, et al. Streptococcus parasanguinis PubMed ↗
Journal of cystic fibrosis · 2023 The gut microbiome, short chain fatty acids, and related metabolites in cystic fibrosis patients with and without colonic adenomas. Baldwin-Hunter BL, Rozenberg FD, Annavajhala MK, et al. Bacteroides fragilis PubMed ↗
Microbiology spectrum · 2022 Statistical Evaluation of Metaproteomics and 16S rRNA Amplicon Sequencing Techniques for Study of Gut Microbiota Establishment in Infants with Cystic Fibrosis. Saralegui C, García-Durán C, Romeu E, et al. Mediterraneibacter gnavus PubMed ↗
Microbiology spectrum · 2022 Intra- and Interspecies Spread of a Novel Conjugative Multidrug Resistance IncC Plasmid Coharboring blaOXA-181 and armA in a Cystic Fibrosis Patient. Fernandez JE, Seth-Smith HMB, Nordmann P, et al. Klebsiella pneumoniae PubMed ↗
Journal of cystic fibrosis · 2021 Intestinal function and transit associate with gut microbiota dysbiosis in cystic fibrosis. Marsh R, Gavillet H, Hanson L, et al. Escherichia coliFaecalibacterium prausnitzii PubMed ↗
Animal study The ISME journal · 2022 Pseudomonas aeruginosa polysaccharide Psl supports airway microbial community development. Stoner SN, Baty JJ, Scoffield JA Streptococcus salivarius PubMed ↗