1. 
   Microbe Basidiomycota

   Georgefischeriaceae NameIn the phylum Basidiomycota
2. 
   Microbe Basidiomycota

   Jaminaea NameIn the phylum Basidiomycota
3. Research Scientific reports · 2024

   Associations between bacterial and fungal communities in the human gut microbiota and their implications for nutritional status and body weigh t.

   Akkermansia muciniphila

   MeaningAbout Basidiomycota
   PubMed ↗
4. 
   Microbe Basidiomycota

   Malassezia restricta NameIn the phylum Basidiomycota
   under 1% of healthy people
5. 
   Microbe Basidiomycota

   Exobasidium NameIn the phylum Basidiomycota
6. 
   Microbe Basidiomycota

   Quambalaria NameIn the phylum Basidiomycota
7. 
   Microbe Basidiomycota

   Malassezia NameIn the phylum Basidiomycota
   under 1% of healthy people
8. 
   Microbe Actinomycetota

   Schaalia turicensis MeaningAbout Basidiomycota
   2.3% of healthy people
9. 
   Microbe Basidiomycota

   Trichosporon asahii NameIn the phylum Basidiomycota
   under 1% of healthy people
10. 
    Microbe Actinomycetota

    Schaalia odontolytica MeaningAbout Basidiomycota
    15% of healthy people
11. 
    Microbe Basidiomycota

    Phenoliferia psychrophila NameIn the phylum Basidiomycota
12. Research Journal of gastroenterology and hepatology · 2024 Systematic review

    Postcholecystectomy Gut Microbiome Changes and the Clinical Impact: A Systematic Review With Narrative Synthesis.

    Phocaeicola vulgatusBifidobacterium longumSegatella copri

    MeaningAbout Basidiomycota
    PubMed ↗
13. Research Veterinary dermatology · 2025 Animal study

    The cutaneous microbiota and Nannizziomycosis in bearded dragons (Pogona vitticeps): Associations between infectious Nannizziopsis species and common bacterial pathogens.

    Bifidobacterium adolescentis

    MeaningAbout Basidiomycota
    PubMed ↗
14. 
    Microbe Ascomycota

    Bagnisiella MeaningAbout Basidiomycota
15. 
    Microbe Basidiomycota

    Ditangium NameIn the phylum Basidiomycota
16. 
    Microbe Ascomycota

    Pallidocercospora MeaningAbout Basidiomycota
17. Research Poultry science · 2026 Animal study

    Effects of dietary Phellinus linteus polysaccharides supplementation on productive performance, egg quality, antioxidant status, immune function, cecal microbiota, jejunal morphology, and metabolism in laying hens under lipopolysaccharide challenge.

    Faecalibacterium prausnitzii

    KeywordKeyword: Basidiomycota
    PubMed ↗
18. 
    Microbe Pseudomonadota

    Aliidiomarina MeaningAbout Basidiomycota
    under 1% of healthy people
19. Research Current issues in molecular biology · 2021

    Evaluation of Microbiome Alterations Following Consumption of BIOHM, a Novel Probiotic.

    Bifidobacterium breve

    MeaningAbout Basidiomycota
    PubMed ↗
20. Research European journal of obstetrics, gynecology, and reproductive biology · 2025 Systematic review

    Deciphering the relationship between adenomyosis and the microbiota: a systematic review.

    Segatella copri

    MeaningAbout Basidiomycota
    PubMed ↗
21. Research Scientific reports · 2019 Animal study

    Parasitoid envenomation alters the Galleria mellonella midgut microbiota and immunity, thereby promoting fungal infection.

    Enterococcus faecalis

    MeaningAbout Basidiomycota
    PubMed ↗
22. 
    Microbe Basidiomycota

    Trichosporon NameIn the phylum Basidiomycota
    under 1% of healthy people
23. Research International journal of molecular sciences · 2026 Systematic review

    Gut, Oral, and Fungal Microbiota in Hypertension: A Multi-Compartment Systematic Review.

    Mediterraneibacter gnavus

    MeaningAbout Basidiomycota
    PubMed ↗
24. 
    Microbe Pseudomonadota

    Bauldia MeaningAbout Basidiomycota
25. Research Journal of the science of food and agriculture · 2025

    Elucidation of the pathway for Dictyophora indusiata polysaccharide-regulated differential acetic acid production by Bifidobacterium longum F2.

    Bifidobacterium longum

    KeywordKeyword: Basidiomycota
    PubMed ↗
26. Research Journal of microbiology · 2019 Animal study

    Gastrointestinal microbiota alteration induced by Mucor circinelloides in a murine model.

    Akkermansia muciniphila

    MeaningAbout Basidiomycota
    PubMed ↗
27. Research Journal of the science of food and agriculture · 2024

    Structural characterization of a novel polysaccharide from Tremella fuciformis and its interaction with gut microbiota.

    Parabacteroides distasonisParabacteroides merdae

    KeywordKeyword: Basidiomycota
    PubMed ↗
28. 
    Microbe Pseudomonadota

    Basfia MeaningAbout Basidiomycota
29. Research Journal of toxicology and environmental health. Part A · 2018 Animal study

    Molecular identification and phylogenetic analysis of Bothrops insularis bacterial and fungal microbiota.

    Enterococcus faecalis

    MeaningAbout Basidiomycota
    PubMed ↗
30. Research International journal of systematic and evolutionary microbiology · 2022

    Pararoseburia lenta gen. nov., sp. nov. isolated from human faeces.

    Roseburia faecisRoseburia hominis

    MeaningAbout Basidiomycota
    PubMed ↗
31. 
    Microbe Glomeromycota

    Funneliformis MeaningAbout Basidiomycota
32. 
    Microbe Ascomycota

    Scleromitrula MeaningAbout Basidiomycota
33. 
    Microbe Bacillota

    Sporosarcina globispora MeaningAbout Basidiomycota
    under 1% of healthy people
34. 
    Microbe Ascomycota

    Sphaerulina MeaningAbout Basidiomycota
35. 
    Microbe Ascomycota

    Penicillium MeaningAbout Basidiomycota
36. 
    Microbe Actinomycetota

    Trueperella bernardiae MeaningAbout Basidiomycota
    under 1% of healthy people
37. 
    Microbe Mycoplasmatota

    Mycoplasmopsis pulmonis MeaningAbout Basidiomycota
    under 1% of healthy people
38. 
    Microbe Bacteroidota

    Rubidimonas MeaningAbout Basidiomycota
39. 
    Microbe Ascomycota

    Debaryomyces MeaningAbout Basidiomycota
    under 1% of healthy people
40. 
    Microbe Ascomycota

    Bacillicladium MeaningAbout Basidiomycota

Research: PubMed, U.S. National Library of Medicine · citations link to PubMed