1. 
   Microbe Basidiomycota

   Ditangium KeywordIts page mentions Agaricomycetes
2. 
   Microbe Ascomycota

   Saccharomyces MeaningAbout Agaricomycetes
   under 1% of healthy people
3. 
   Microbe Actinomycetota

   Agromyces MeaningAbout Agaricomycetes
4. 
   Microbe Candidatus Melainabacteria

   Candidatus Gastranaerophilales MeaningAbout Agaricomycetes
5. 
   Microbe Actinomycetota

   Glycomyces MeaningAbout Agaricomycetes
6. 
   Microbe Pseudomonadota

   Agaricicola MeaningAbout Agaricomycetes
7. 
   Microbe Ascomycota

   Pichia manshurica MeaningAbout Agaricomycetes
   under 1% of healthy people
8. Research Environmental entomology · 2017 Animal study

   Yeasts Harbored by Vespine Wasps in the Pacific Northwest.

   Enterococcus faecalis

   MeaningAbout Agaricomycetes
   PubMed ↗
9. Research Frontiers in veterinary science · 2022

   Assessment of the Endophytic Fungal Composition of Lactobacillus plantarum and Enterococcus faecalis-Fermented Astragalus membranaceus Using Single-Molecule, Real-Time Sequencing Technology.

   Enterococcus faecalisEnterococcus faecium

   MeaningAbout Agaricomycetes
   PubMed ↗
10. 
    Microbe Bacillota

    Cytobacillus oceanisediminis MeaningAbout Agaricomycetes
    under 1% of healthy people
11. Research Foods · 2025

    Polyphasic Characterisation of Microbiota Associated with Sant'Agostino Table Olives Flavoured with Foeniculum vulgare.

    Enterococcus faecium

    MeaningAbout Agaricomycetes
    PubMed ↗
12. 
    Microbe Bacillota

    Aerococcus agrisoli MeaningAbout Agaricomycetes
    under 1% of healthy people
13. 
    Microbe Basidiomycota

    Georgefischeriaceae MeaningAbout Agaricomycetes
14. 
    Microbe Ascomycota

    Exutisphaerella MeaningAbout Agaricomycetes
15. Research International journal of food science · 2025

    Molecular Characterization of Culturable Yeasts and Nonspore-Forming Bacteria Associated With Fermented Kapok Seeds (Kantong), a Traditional Food Condiment in Ghana.

    Klebsiella pneumoniaeEnterococcus faecium

    MeaningAbout Agaricomycetes
    PubMed ↗
16. Research Food microbiology · 2019

    Lactococcus lactis subsp. lactis as a natural anti-listerial agent in the mushroom industry.

    Lactococcus lactis

    MeaningAbout Agaricomycetes
    PubMed ↗
17. 
    Microbe Ascomycota

    Saccharomyces pastorianus MeaningAbout Agaricomycetes
18. Research Frontiers in microbiology · 2022

    The Bacterial and Fungal Microbiota of "Robiola di Roccaverano" Protected Designation of Origin Raw Milk Cheese.

    Lactococcus lactis

    MeaningAbout Agaricomycetes
    PubMed ↗
19. Research International journal of food microbiology · 2022

    Ecological linkages between biotechnologically relevant autochthonous microorganisms and phenolic compounds in sugar apple fruit (Annona squamosa L.).

    Lactococcus lactisEnterococcus faecalis

    MeaningAbout Agaricomycetes
    PubMed ↗
20. Research Gut pathogens · 2025

    Thomasclavelia ramosa and alcohol-related hepatocellular carcinoma: a microbial culturomics study.

    Thomasclavelia ramosaMediterraneibacter gnavusGemmiger formicilis

    MeaningAbout Agaricomycetes
    PubMed ↗
21. 
    Microbe Verrucomicrobiota

    Lacunisphaera MeaningAbout Agaricomycetes
22. Research Food microbiology · 2023

    Weather factors, soil microbiome, and bacteria-fungi interactions as drivers of the epiphytic phyllosphere communities of romaine lettuce.

    Escherichia coli

    MeaningAbout Agaricomycetes
    PubMed ↗
23. 
    Microbe Bacillota

    Melghirimyces MeaningAbout Agaricomycetes
24. Research Frontiers in veterinary science · 2025

    Agaricus bisporus stipe fed to dairy heifers: effects on growth performance, immunity and antioxidant capacity, and rumen microbiota.

    Akkermansia muciniphila

    MeaningAbout Agaricomycetes
    PubMed ↗
25. 
    Microbe Ascomycota

    Clavispora MeaningAbout Agaricomycetes
    under 1% of healthy people
26. Research Microorganisms · 2025 Review

    Exploring Eco-Friendly Microbial Strategies for Nosemosis Control in Honeybee.

    Enterococcus faecium

    MeaningAbout Agaricomycetes
    PubMed ↗
27. Research Food research international · 2026

    Bioactive molecules from Agave salmiana bagasse: Study of their antioxidant, prebiotic potential, and cytotoxicity.

    Enterococcus faeciumBifidobacterium animalis

    MeaningAbout Agaricomycetes
    PubMed ↗
28. Research Journal of microbiology and biotechnology · 2018

    Identification of LAB and Fungi in Laru, a Fermentation Starter, by PCR-DGGE, SDS-PAGE, and MALDI-TOF MS.

    Lactococcus lactis

    MeaningAbout Agaricomycetes
    PubMed ↗
29. Research Foods · 2020

    Microbial Ecology of Greek Wheat Sourdoughs, Identified by a Culture-Dependent and a Culture-Independent Approach.

    Lactococcus lactis

    MeaningAbout Agaricomycetes
    PubMed ↗
30. Research Frontiers in microbiology · 2023

    Features of combined gut bacteria and fungi from a Chinese cohort of colorectal cancer, colorectal adenoma, and post-operative patients.

    Bifidobacterium bifidum

    MeaningAbout Agaricomycetes
    PubMed ↗
31. Research Microorganisms · 2023

    Microbial Dynamics of a Specialty Italian Raw Ewe's Milk Cheese Curdled with Extracts from Spontaneous and Cultivated Onopordum tauricum Willd.

    Lactococcus lactis

    MeaningAbout Agaricomycetes
    PubMed ↗

Research: PubMed, U.S. National Library of Medicine · citations link to PubMed