Named species · GMrepo v3 · NCBI lineage

Microbes

Understood as Actinomycetota Edit them in the filters below, or rephrase.

375 species

Most studiedMost common in healthy guts

Species	Healthy guts	Samples ↓	Products
Bifidobacterium longum Actinomycetota · Bifidobacteriaceae	76%	16,852	1,355
Collinsella aerofaciens Actinomycetota · Coriobacteriaceae	65%	14,053	0
Eggerthella lenta Actinomycetota · Eggerthellaceae	45%	11,499	0
Bifidobacterium adolescentis Actinomycetota · Bifidobacteriaceae	53%	10,367	13
Adlercreutzia equolifaciens Actinomycetota · Eggerthellaceae	44%	9,183	0
Bifidobacterium pseudocatenulatum Actinomycetota · Bifidobacteriaceae	37%	8,523	0
Bifidobacterium bifidum Actinomycetota · Bifidobacteriaceae	28%	5,813	1,272
Rothia mucilaginosa Actinomycetota · Micrococcaceae	18%	4,642	0
Gordonibacter pamelaeae Actinomycetota · Eggerthellaceae	21%	4,634	0
Schaalia odontolytica Actinomycetota · Actinomycetaceae	15%	3,497	0
Senegalimassilia anaerobia Actinomycetota · Coriobacteriaceae	17%	3,490	0
Slackia isoflavoniconvertens Actinomycetota · Eggerthellaceae	16%	3,071	0
Bifidobacterium dentium Actinomycetota · Bifidobacteriaceae	9.8%	2,771	0
Bifidobacterium catenulatum Actinomycetota · Bifidobacteriaceae	15%	2,651	0
Bifidobacterium breve Actinomycetota · Bifidobacteriaceae	11%	2,645	713
Actinomyces graevenitzii Actinomycetota · Actinomycetaceae	11%	2,585	0
Actinomyces oris Actinomycetota · Actinomycetaceae	9.7%	2,494	0
Gordonibacter urolithinfaciens Actinomycetota · Eggerthellaceae	11%	2,239	0
Ellagibacter isourolithinifaciens Actinomycetota · Eggerthellaceae	12%	2,192	0
Bifidobacterium animalis Actinomycetota · Bifidobacteriaceae	7.4%	1,915	1,443
Lancefieldella parvula Actinomycetota · Atopobiaceae	4.7%	1,523	0
Actinomyces bouchesdurhonensis Actinomycetota · Actinomycetaceae	6.4%	1,513	0
Collinsella intestinalis Actinomycetota · Coriobacteriaceae	5.3%	1,427	0
Collinsella bouchesdurhonensis Actinomycetota · Coriobacteriaceae	7.1%	1,394	0
Paratractidigestivibacter faecalis Actinomycetota · Atopobiaceae	7.1%	1,383	0
Raoultibacter timonensis Actinomycetota · Eggerthellaceae	5.0%	1,351	0
Actinomyces naeslundii Actinomycetota · Actinomycetaceae	4.8%	1,226	0
Actinomyces dentalis Actinomycetota · Actinomycetaceae	2.9%	923	0
Collinsella tanakaei Actinomycetota · Coriobacteriaceae	3.3%	888	0
Corynebacterium durum Actinomycetota · Corynebacteriaceae	2.8%	766	0
Scardovia wiggsiae Actinomycetota · Bifidobacteriaceae	1.6%	742	0
Enorma massiliensis Actinomycetota · Coriobacteriaceae	2.7%	723	0
Senegalimassilia faecalis Actinomycetota · Coriobacteriaceae	3.4%	720	0
Raoultibacter massiliensis Actinomycetota · Eggerthellaceae	3.1%	710	0
Eggerthella sinensis Actinomycetota · Eggerthellaceae	1.7%	609	0
Bifidobacterium angulatum Actinomycetota · Bifidobacteriaceae	3.8%	604	0
Schaalia turicensis Actinomycetota · Actinomycetaceae	2.3%	577	0
Actinomyces massiliensis Actinomycetota · Actinomycetaceae	2.1%	563	0
Alloscardovia omnicolens Actinomycetota · Bifidobacteriaceae	1.6%	554	0
Parolsenella catena Actinomycetota · Atopobiaceae	3.0%	538	0
Varibaculum cambriense Actinomycetota · Actinomycetaceae	1.7%	505	0
Slackia piriformis Actinomycetota · Eggerthellaceae	2.3%	457	0
Rubneribacter badeniensis Actinomycetota · Eggerthellaceae	1.9%	441	0
Gardnerella vaginalis Actinomycetota · Bifidobacteriaceae	1.7%	435	0
Propionibacterium acidifaciens Actinomycetota · Propionibacteriaceae	1.2%	427	0
Lancefieldella rimae Actinomycetota · Atopobiaceae	1.3%	418	0
Pauljensenia hongkongensis Actinomycetota · Actinomycetaceae	1.1%	402	0
Actinomyces johnsonii Actinomycetota · Actinomycetaceae	1.5%	399	0
Actinomyces gerencseriae Actinomycetota · Actinomycetaceae	1.5%	384	0
Schaalia meyeri Actinomycetota · Actinomycetaceae	1.0%	376	0
Collinsella stercoris Actinomycetota · Coriobacteriaceae	1.4%	374	0
Thermophilibacter provencensis Actinomycetota · Atopobiaceae	1.6%	349	0
Enteroscipio rubneri Actinomycetota · Eggerthellaceae	1.6%	333	0
Bifidobacterium pullorum Actinomycetota · Bifidobacteriaceae	1.1%	326	0
Olsenella timonensis Actinomycetota · Atopobiaceae	1.5%	313	0
Propionibacterium freudenreichii Actinomycetota · Propionibacteriaceae	1.1%	303	8
Olsenella uli Actinomycetota · Atopobiaceae	<1%	301	0
Slackia exigua Actinomycetota · Eggerthellaceae	<1%	292	0
Slackia equolifaciens Actinomycetota · Eggerthellaceae	<1%	281	0
Corynebacterium argentoratense Actinomycetota · Corynebacteriaceae	1.1%	272	0
Parascardovia denticolens Actinomycetota · Bifidobacteriaceae	<1%	270	0
Cutibacterium acnes Actinomycetota · Propionibacteriaceae	1.1%	267	0
Paraeggerthella hongkongensis Actinomycetota · Eggerthellaceae	<1%	234	0
Eggerthella guodeyinii Actinomycetota · Eggerthellaceae	<1%	222	0
Olsenella profusa Actinomycetota · Atopobiaceae	<1%	208	0
Rothia aeria Actinomycetota · Micrococcaceae	<1%	208	0
[Collinsella] massiliensis Actinomycetota · Coriobacteriaceae	<1%	203	0
Arachnia rubra Actinomycetota · Propionibacteriaceae	<1%	189	0
Arachnia propionica Actinomycetota · Propionibacteriaceae	<1%	188	0
Gordonibacter massiliensis (ex Traore et al. 2017) Actinomycetota · Eggerthellaceae	<1%	181	0
Corynebacterium aurimucosum Actinomycetota · Corynebacteriaceae	<1%	172	0
Fannyhessea vaginae Actinomycetota · Atopobiaceae	<1%	157	0
Bifidobacterium pseudolongum Actinomycetota · Bifidobacteriaceae	<1%	155	0
Atopobium deltae Actinomycetota · Atopobiaceae	<1%	135	0
Corynebacterium amycolatum Actinomycetota · Corynebacteriaceae	<1%	135	0
Tractidigestivibacter montrealensis Actinomycetota · Atopobiaceae	<1%	122	0
Bifidobacterium scardovii Actinomycetota · Bifidobacteriaceae	<1%	121	0
Schaalia cardiffensis Actinomycetota · Actinomycetaceae	<1%	118	0
Scardovia inopinata Actinomycetota · Bifidobacteriaceae	<1%	105	0
Lawsonella clevelandensis Actinomycetota · Lawsonellaceae	<1%	104	0
Olsenella phocaeensis Actinomycetota · Atopobiaceae	<1%	101	0
Bifidobacterium ruminantium Actinomycetota · Bifidobacteriaceae	<1%	98	0
Cutibacterium avidum Actinomycetota · Propionibacteriaceae	<1%	96	0
Cryptobacterium curtum Actinomycetota · Eggerthellaceae	<1%	89	0
Actinomyces israelii Actinomycetota · Actinomycetaceae	<1%	87	0
Peptidiphaga gingivicola Actinomycetota · Actinomycetaceae	<1%	81	0
Actinomyces urogenitalis Actinomycetota · Actinomycetaceae	<1%	74	0
Parafannyhessea umbonata Actinomycetota · Atopobiaceae	<1%	68	0
Enorma burkinafasonensis Actinomycetota · Coriobacteriaceae	<1%	66	0
Atopobium minutum Actinomycetota · Atopobiaceae	<1%	65	0
Collinsella phocaeensis Actinomycetota · Coriobacteriaceae	<1%	65	0
Adlercreutzia aquisgranensis Actinomycetota · Eggerthellaceae	<1%	63	0
Corynebacterium pseudodiphtheriticum Actinomycetota · Corynebacteriaceae	<1%	63	0
Corynebacterium propinquum Actinomycetota · Corynebacteriaceae	<1%	62	0
Corynebacterium variabile Actinomycetota · Corynebacteriaceae	<1%	62	0
Parolsenella massiliensis Actinomycetota · Atopobiaceae	<1%	61	0
Enorma phocaeensis Actinomycetota · Coriobacteriaceae	<1%	60	0
Arcanobacterium urinimassiliense Actinomycetota · Actinomycetaceae	<1%	56	0
Adlercreutzia faecimuris Actinomycetota · Eggerthellaceae	<1%	53	0
Phoenicibacter congonensis Actinomycetota · Eggerthellaceae	<1%	52	0
Winkia neuii Actinomycetota · Actinomycetaceae	<1%	52	0
Olegusella massiliensis Actinomycetota · Coriobacteriaceae	<1%	51	0
Corynebacterium tuberculostearicum Actinomycetota · Corynebacteriaceae	<1%	50	0
Schaalia georgiae Actinomycetota · Actinomycetaceae	<1%	48	0
Parvibacter caecicola Actinomycetota · Coriobacteriaceae	<1%	45	0
Corynebacterium accolens Actinomycetota · Corynebacteriaceae	<1%	44	0
Adlercreutzia muris Actinomycetota · Eggerthellaceae	<1%	43	0
Corynebacterium pyruviciproducens Actinomycetota · Corynebacteriaceae	<1%	39	0
Actinomyces timonensis Actinomycetota · Actinomycetaceae	<1%	38	0
Corynebacterium kefirresidentii Actinomycetota · Corynebacteriaceae	<1%	37	0
Tropheryma whipplei Actinomycetota · Tropherymataceae	<1%	35	0
Adlercreutzia caecimuris Actinomycetota · Eggerthellaceae	<1%	34	0
Cutibacterium granulosum Actinomycetota · Propionibacteriaceae	<1%	34	0
Rothia kristinae Actinomycetota · Micrococcaceae	<1%	33	0
Collinsella provencensis Actinomycetota · Coriobacteriaceae	<1%	32	0
Corynebacterium simulans Actinomycetota · Corynebacteriaceae	<1%	32	0
Corynebacterium striatum Actinomycetota · Corynebacteriaceae	<1%	32	0
Actinomyces radicidentis Actinomycetota · Actinomycetaceae	<1%	31	0
Trueperella bernardiae Actinomycetota · Actinomycetaceae	<1%	30	0
Actinotignum timonense Actinomycetota · Actinomycetaceae	<1%	28	0
Adlercreutzia mucosicola Actinomycetota · Eggerthellaceae	<1%	28	0
Corynebacterium jeikeium Actinomycetota · Corynebacteriaceae	<1%	26	0
Corynebacterium pseudogenitalium Actinomycetota · Corynebacteriaceae	<1%	26	0
Corynebacterium atypicum Actinomycetota · Corynebacteriaceae	<1%	25	0
Corynebacterium genitalium Actinomycetota · Corynebacteriaceae	<1%	25	0
Dermabacter hominis Actinomycetota · Dermabacteraceae	<1%	25	0
Curtanaerobium respiraculi Actinomycetota · Eggerthellaceae	<1%	22	0
Bifidobacterium moukalabense Actinomycetota · Bifidobacteriaceae	<1%	21	0
Corynebacterium matruchotii Actinomycetota · Corynebacteriaceae	<1%	21	0
Kocuria rhizophila Actinomycetota · Micrococcaceae	<1%	21	0
Berryella intestinalis Actinomycetota · Eggerthellaceae	<1%	20	0
Bifidobacterium canis Actinomycetota · Bifidobacteriaceae	<1%	20	0
Corynebacterium coyleae Actinomycetota · Corynebacteriaceae	<1%	20	0
Micrococcus luteus Actinomycetota · Micrococcaceae	<1%	20	0
Kocuria salsicia Actinomycetota · Micrococcaceae	<1%	19	0
Olsenella urininfantis Actinomycetota · Atopobiaceae	<1%	19	0
Eggerthella timonensis Actinomycetota · Eggerthellaceae	<1%	18	0
Varibaculum massiliense Actinomycetota · Actinomycetaceae	<1%	17	0
Corynebacterium afermentans Actinomycetota · Corynebacteriaceae	<1%	16	0
Corynebacterium urealyticum Actinomycetota · Corynebacteriaceae	0%	15	0
Microbacterium paulum Actinomycetota · Microbacteriaceae	<1%	15	0
[Pseudopropionibacterium] massiliense Actinomycetota · Propionibacteriaceae	<1%	14	0
Actinomyces oricola Actinomycetota · Actinomycetaceae	<1%	14	0
Microbacterium lacticum Actinomycetota · Microbacteriaceae	<1%	14	0
Tessaracoccus timonensis Actinomycetota · Propionibacteriaceae	<1%	14	0
Corynebacterium frankenforstense Actinomycetota · Corynebacteriaceae	<1%	13	0
Corynebacterium pseudokroppenstedtii Actinomycetota · Corynebacteriaceae	<1%	13	0
Mycobacterium tuberculosis Actinomycetota · Mycobacteriaceae	<1%	13	0
Acidipropionibacterium acidipropionici Actinomycetota · Propionibacteriaceae	<1%	12	0
Actinobaculum massiliense Actinomycetota · Actinomycetaceae	<1%	12	0
Arthrobacter globiformis Actinomycetota · Micrococcaceae	<1%	12	0
Bifidobacterium merycicum Actinomycetota · Bifidobacteriaceae	<1%	12	0
Brevibacterium paucivorans Actinomycetota · Brevibacteriaceae	<1%	12	0
Propionimicrobium lymphophilum Actinomycetota · Propionibacteriaceae	<1%	12	0
Rothia terrae Actinomycetota · Micrococcaceae	<1%	12	0
Actinomyces haliotis Actinomycetota · Actinomycetaceae	<1%	11	0
Actinotignum sanguinis Actinomycetota · Actinomycetaceae	<1%	11	0
Clavibacter michiganensis Actinomycetota · Microbacteriaceae	<1%	11	0
Corynebacterium parakroppenstedtii Actinomycetota · Corynebacteriaceae	<1%	11	0
Corynebacterium tuscaniense Actinomycetota · Corynebacteriaceae	<1%	11	0
Cutibacterium namnetense Actinomycetota · Propionibacteriaceae	<1%	11	0
Cutibacterium modestum Actinomycetota · Propionibacteriaceae	<1%	10	0
Hugonella massiliensis Actinomycetota · Eggerthellaceae	<1%	10	0
Nocardioides litoris Actinomycetota · Nocardioidaceae	<1%	10	0
Olsenella porci Actinomycetota · Atopobiaceae	<1%	10	0
Thermophilibacter gallinarum Actinomycetota · Atopobiaceae	<1%	10	0
Tractidigestivibacter scatoligenes Actinomycetota · Atopobiaceae	<1%	10	0
Actinotignum schaalii Actinomycetota · Actinomycetaceae	<1%	9	0
Arcanobacterium haemolyticum Actinomycetota · Actinomycetaceae	<1%	9	0
Corynebacterium falsenii Actinomycetota · Corynebacteriaceae	<1%	9	0
Gulosibacter hominis Actinomycetota · Microbacteriaceae	<1%	9	0
Microbacterium oxydans Actinomycetota · Microbacteriaceae	<1%	9	0
Bifidobacterium crudilactis Actinomycetota · Bifidobacteriaceae	<1%	8	0
Bifidobacterium mongoliense Actinomycetota · Bifidobacteriaceae	<1%	8	0
Corynebacterium imitans Actinomycetota · Corynebacteriaceae	<1%	8	0
Corynebacterium neomassiliense Actinomycetota · Corynebacteriaceae	<1%	8	0
Kocuria palustris Actinomycetota · Micrococcaceae	<1%	8	0
Leptogranulimonas caecicola Actinomycetota · Kribbibacteriaceae	<1%	8	0
Pseudoglutamicibacter cumminsii Actinomycetota · Micrococcaceae	<1%	8	0
Thermophilibacter mediterraneus Actinomycetota · Atopobiaceae	<1%	8	0
Actinomyces mediterranea Actinomycetota · Actinomycetaceae	0%	7	0
Brachybacterium paraconglomeratum Actinomycetota · Dermabacteraceae	<1%	7	0
Brevibacterium rongguiense Actinomycetota · Brevibacteriaceae	<1%	7	0
Corynebacterium glutamicum Actinomycetota · Corynebacteriaceae	<1%	7	0
Corynebacterium yonathiae Actinomycetota · Corynebacteriaceae	<1%	7	0
Microcella alkaliphila Actinomycetota · Microbacteriaceae	0%	7	0
Mobiluncus curtisii Actinomycetota · Actinomycetaceae	0%	7	0
Rothia koreensis Actinomycetota · Micrococcaceae	<1%	7	0
Brachybacterium timonense Actinomycetota · Dermabacteraceae	<1%	6	0
Corynebacterium casei Actinomycetota · Corynebacteriaceae	<1%	6	0
Corynebacterium glucuronolyticum Actinomycetota · Corynebacteriaceae	0%	6	0
Corynebacterium massiliense Actinomycetota · Corynebacteriaceae	<1%	6	0
Corynebacterium vitaeruminis Actinomycetota · Corynebacteriaceae	<1%	6	0
Gordonia sputi Actinomycetota · Gordoniaceae	<1%	6	0
Microbacterium aurum Actinomycetota · Microbacteriaceae	<1%	6	0
Microbacterium paraoxydans Actinomycetota · Microbacteriaceae	<1%	6	0
Rothia endophytica Actinomycetota · Micrococcaceae	<1%	6	0
Actinomyces culturomici Actinomycetota · Actinomycetaceae	<1%	5	0
Corynebacterium callunae Actinomycetota · Corynebacteriaceae	<1%	5	0
Corynebacterium jeddahense Actinomycetota · Corynebacteriaceae	0%	5	0
Corynebacterium nuruki Actinomycetota · Corynebacteriaceae	<1%	5	0
Corynebacterium riegelii Actinomycetota · Corynebacteriaceae	0%	5	0
Kocuria marina subsp. indica Actinomycetota · Micrococcaceae	<1%	5	0
Mycobacterium avium Actinomycetota · Mycobacteriaceae	0%	5	0
Raoultibacter phocaeensis Actinomycetota · Eggerthellaceae	<1%	5	0
Rhodococcoides fascians Actinomycetota · Nocardiaceae	<1%	5	0
Rhodococcus qingshengii Actinomycetota · Nocardiaceae	<1%	5	0
Arthrobacter woluwensis Actinomycetota · Micrococcaceae	<1%	4	0
Bifidobacterium asteroides Actinomycetota · Bifidobacteriaceae	0%	4	0
Brachybacterium nesterenkovii Actinomycetota · Dermabacteraceae	<1%	4	0
Brachybacterium squillarum Actinomycetota · Dermabacteraceae	<1%	4	0
Brevibacterium aurantiacum Actinomycetota · Brevibacteriaceae	<1%	4	0
Brevibacterium mcbrellneri Actinomycetota · Brevibacteriaceae	<1%	4	0
Collinsella vaginalis Actinomycetota · Coriobacteriaceae	0%	4	0
Corynebacterium dentalis Actinomycetota · Corynebacteriaceae	<1%	4	0
Corynebacterium phoceense Actinomycetota · Corynebacteriaceae	<1%	4	0
Corynebacterium suicordis Actinomycetota · Corynebacteriaceae	<1%	4	0
Corynebacterium testudinoris Actinomycetota · Corynebacteriaceae	<1%	4	0
Isoptericola variabilis Actinomycetota · Promicromonosporaceae	0%	4	0
Microlunatus phosphovorus Actinomycetota · Propionibacteriaceae	<1%	4	0
Nocardia seriolae Actinomycetota · Nocardiaceae	<1%	4	0
Plantibacter flavus Actinomycetota · Microbacteriaceae	<1%	4	0
Propioniciclava flava Actinomycetota · Propionibacteriaceae	<1%	4	0
Rhodococcus pyridinivorans Actinomycetota · Nocardiaceae	<1%	4	0
Actinomyces faecalis Actinomycetota · Actinomycetaceae	<1%	3	0
Bifidobacterium anseris Actinomycetota · Bifidobacteriaceae	<1%	3	0
Bifidobacterium erythrocebi Actinomycetota · Bifidobacteriaceae	<1%	3	0
Bifidobacterium psychraerophilum Actinomycetota · Bifidobacteriaceae	<1%	3	0
Brevibacterium ravenspurgense Actinomycetota · Brevibacteriaceae	0%	3	0
Corynebacterium flavescens Actinomycetota · Corynebacteriaceae	<1%	3	0
Corynebacterium lujinxingii Actinomycetota · Corynebacteriaceae	0%	3	0
Corynebacterium minutissimum Actinomycetota · Corynebacteriaceae	0%	3	0
Corynebacterium otitidis Actinomycetota · Corynebacteriaceae	<1%	3	0
Corynebacterium sputi Actinomycetota · Corynebacteriaceae	<1%	3	0
Dermacoccus nishinomiyaensis Actinomycetota · Dermacoccaceae	<1%	3	0
Gordonia jacobaea Actinomycetota · Gordoniaceae	<1%	3	0
Gordonia otitidis Actinomycetota · Gordoniaceae	<1%	3	0
Microbacterium maritypicum Actinomycetota · Microbacteriaceae	<1%	3	0
Piscicoccus intestinalis Actinomycetota · Dermatophilaceae	<1%	3	0
Acidipropionibacterium jensenii Actinomycetota · Propionibacteriaceae	<1%	2	0
Actinomyces urinae Actinomycetota · Actinomycetaceae	0%	2	0
Anaerotardibacter muris Actinomycetota · Eggerthellaceae	0%	2	0
Bifidobacterium coryneforme Actinomycetota · Bifidobacteriaceae	0%	2	0
Bifidobacterium thermophilum Actinomycetota · Bifidobacteriaceae	0%	2	0
Brevibacterium casei Actinomycetota · Brevibacteriaceae	<1%	2	0
Brevibacterium epidermidis Actinomycetota · Brevibacteriaceae	0%	2	0
Brevibacterium iodinum Actinomycetota · Brevibacteriaceae	0%	2	0
Brevibacterium linens Actinomycetota · Brevibacteriaceae	0%	2	0
Brevibacterium pigmentatum Actinomycetota · Brevibacteriaceae	0%	2	0
Cellulosimicrobium cellulans Actinomycetota · Promicromonosporaceae	<1%	2	0

Showing 1–250 of 375 Show 50 more